Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TOMM40O96008 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TOMM40O96008 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TOMM40O96008 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TOMM40O96008 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOMM40O96008 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TOMM40O96008 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOMM40O96008 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOMM40O96008 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.19■□□□□ 0.5
TOMM40O96008 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TOMM40O96008 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOMM40O96008 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.19■□□□□ 0.5
TOMM40O96008 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.19■□□□□ 0.5
TOMM40O96008 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.19■□□□□ 0.5
TOMM40O96008 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TOMM40O96008 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.18■□□□□ 0.5
TOMM40O96008 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.18■□□□□ 0.5
TOMM40O96008 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TOMM40O96008 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOMM40O96008 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOMM40O96008 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOMM40O96008 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TOMM40O96008 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOMM40O96008 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.17■□□□□ 0.5
TOMM40O96008 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.17■□□□□ 0.5
TOMM40O96008 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOMM40O96008 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TOMM40O96008 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TOMM40O96008 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.17■□□□□ 0.5
TOMM40O96008 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TOMM40O96008 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOMM40O96008 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOMM40O96008 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TOMM40O96008 FOXO3B-201ENST00000395675 1928 ntBASIC18.16■□□□□ 0.5
TOMM40O96008 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOMM40O96008 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TOMM40O96008 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TOMM40O96008 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TOMM40O96008 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TOMM40O96008 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.15■□□□□ 0.5
TOMM40O96008 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOMM40O96008 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TOMM40O96008 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOMM40O96008 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TOMM40O96008 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TOMM40O96008 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.14■□□□□ 0.5
TOMM40O96008 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TOMM40O96008 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TOMM40O96008 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOMM40O96008 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOMM40O96008 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.14■□□□□ 0.49
TOMM40O96008 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.14■□□□□ 0.49
TOMM40O96008 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOMM40O96008 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TOMM40O96008 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
TOMM40O96008 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.14■□□□□ 0.49
TOMM40O96008 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TOMM40O96008 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TOMM40O96008 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TOMM40O96008 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.13■□□□□ 0.49
TOMM40O96008 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TOMM40O96008 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TOMM40O96008 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TOMM40O96008 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.13■□□□□ 0.49
TOMM40O96008 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TOMM40O96008 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TOMM40O96008 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TOMM40O96008 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TOMM40O96008 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.13■□□□□ 0.49
TOMM40O96008 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.12■□□□□ 0.49
TOMM40O96008 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TOMM40O96008 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.12■□□□□ 0.49
TOMM40O96008 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TOMM40O96008 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.12■□□□□ 0.49
TOMM40O96008 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TOMM40O96008 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TOMM40O96008 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TOMM40O96008 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TOMM40O96008 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TOMM40O96008 AC009831.1-201ENST00000580420 1582 ntBASIC18.12■□□□□ 0.49
TOMM40O96008 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TOMM40O96008 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TOMM40O96008 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TOMM40O96008 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOMM40O96008 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.11■□□□□ 0.49
TOMM40O96008 AC133552.2-201ENST00000619106 1032 ntBASIC18.11■□□□□ 0.49
TOMM40O96008 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TOMM40O96008 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TOMM40O96008 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TOMM40O96008 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TOMM40O96008 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TOMM40O96008 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.11■□□□□ 0.49
TOMM40O96008 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.11■□□□□ 0.49
TOMM40O96008 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TOMM40O96008 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOMM40O96008 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOMM40O96008 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOMM40O96008 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TOMM40O96008 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TOMM40O96008 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms