Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.37■■□□□ 1.81
GGPS1O95749 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.37■■□□□ 1.81
GGPS1O95749 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.37■■□□□ 1.81
GGPS1O95749 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
GGPS1O95749 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
GGPS1O95749 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
GGPS1O95749 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
GGPS1O95749 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.35■■□□□ 1.81
GGPS1O95749 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.35■■□□□ 1.81
GGPS1O95749 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.35■■□□□ 1.81
GGPS1O95749 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.35■■□□□ 1.81
GGPS1O95749 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.35■■□□□ 1.81
GGPS1O95749 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.35■■□□□ 1.81
GGPS1O95749 MIR6724-1-201ENST00000616420 92 ntBASIC26.35■■□□□ 1.81
GGPS1O95749 MIR6724-2-201ENST00000616483 92 ntBASIC26.35■■□□□ 1.81
GGPS1O95749 MIR6724-4-201ENST00000617390 92 ntBASIC26.35■■□□□ 1.81
GGPS1O95749 MIR6724-3-201ENST00000622482 92 ntBASIC26.35■■□□□ 1.81
GGPS1O95749 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.34■■□□□ 1.81
GGPS1O95749 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.34■■□□□ 1.81
GGPS1O95749 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
GGPS1O95749 AL117332.1-201ENST00000622628 974 ntBASIC26.34■■□□□ 1.81
GGPS1O95749 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
GGPS1O95749 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
GGPS1O95749 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
GGPS1O95749 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.33■■□□□ 1.81
GGPS1O95749 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.33■■□□□ 1.81
GGPS1O95749 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.33■■□□□ 1.81
GGPS1O95749 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.33■■□□□ 1.81
GGPS1O95749 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.33■■□□□ 1.81
GGPS1O95749 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
GGPS1O95749 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
GGPS1O95749 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.32■■□□□ 1.8
GGPS1O95749 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.32■■□□□ 1.8
GGPS1O95749 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
GGPS1O95749 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
GGPS1O95749 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
GGPS1O95749 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GGPS1O95749 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
GGPS1O95749 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.31■■□□□ 1.8
GGPS1O95749 AC131281.2-201ENST00000520478 145 ntBASIC26.31■■□□□ 1.8
GGPS1O95749 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.31■■□□□ 1.8
GGPS1O95749 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
GGPS1O95749 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
GGPS1O95749 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
GGPS1O95749 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.3■■□□□ 1.8
GGPS1O95749 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.29■■□□□ 1.8
GGPS1O95749 MIR3621-201ENST00000580529 85 ntBASIC26.29■■□□□ 1.8
GGPS1O95749 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
GGPS1O95749 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
GGPS1O95749 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
GGPS1O95749 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.28■■□□□ 1.8
GGPS1O95749 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
GGPS1O95749 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
GGPS1O95749 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
GGPS1O95749 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
GGPS1O95749 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.27■■□□□ 1.8
GGPS1O95749 AC019069.1-201ENST00000610008 1333 ntBASIC26.27■■□□□ 1.8
GGPS1O95749 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.27■■□□□ 1.8
GGPS1O95749 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
GGPS1O95749 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
GGPS1O95749 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
GGPS1O95749 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.26■■□□□ 1.79
GGPS1O95749 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.26■■□□□ 1.79
GGPS1O95749 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
GGPS1O95749 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.26■■□□□ 1.79
GGPS1O95749 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.26■■□□□ 1.79
GGPS1O95749 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.26■■□□□ 1.79
GGPS1O95749 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.26■■□□□ 1.79
GGPS1O95749 SNX5-217ENST00000606557 1087 ntBASIC26.26■■□□□ 1.79
GGPS1O95749 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
GGPS1O95749 DUSP8P4-201ENST00000399538 1761 ntBASIC26.25■■□□□ 1.79
GGPS1O95749 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
GGPS1O95749 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.25■■□□□ 1.79
GGPS1O95749 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.25■■□□□ 1.79
GGPS1O95749 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
GGPS1O95749 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
GGPS1O95749 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
GGPS1O95749 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
GGPS1O95749 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.25■■□□□ 1.79
GGPS1O95749 AL356740.2-201ENST00000601559 647 ntBASIC26.25■■□□□ 1.79
GGPS1O95749 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.25■■□□□ 1.79
GGPS1O95749 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
GGPS1O95749 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
GGPS1O95749 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
GGPS1O95749 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.24■■□□□ 1.79
GGPS1O95749 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
GGPS1O95749 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.24■■□□□ 1.79
GGPS1O95749 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
GGPS1O95749 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.23■■□□□ 1.79
GGPS1O95749 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
GGPS1O95749 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.23■■□□□ 1.79
GGPS1O95749 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
GGPS1O95749 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.23■■□□□ 1.79
GGPS1O95749 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.23■■□□□ 1.79
GGPS1O95749 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
GGPS1O95749 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
GGPS1O95749 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
GGPS1O95749 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.23■■□□□ 1.79
GGPS1O95749 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.22■■□□□ 1.79
GGPS1O95749 AC091060.1-201ENST00000623524 1766 ntBASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms