Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB3DO95716 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3DO95716 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB3DO95716 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3DO95716 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3DO95716 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3DO95716 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3DO95716 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RAB3DO95716 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3DO95716 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3DO95716 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.75■□□□□ 0.75
RAB3DO95716 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
RAB3DO95716 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3DO95716 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RAB3DO95716 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RAB3DO95716 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3DO95716 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3DO95716 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.74■□□□□ 0.75
RAB3DO95716 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3DO95716 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3DO95716 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RAB3DO95716 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RAB3DO95716 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3DO95716 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB3DO95716 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3DO95716 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3DO95716 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3DO95716 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.73■□□□□ 0.75
RAB3DO95716 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3DO95716 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB3DO95716 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RAB3DO95716 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB3DO95716 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RAB3DO95716 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3DO95716 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB3DO95716 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3DO95716 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3DO95716 PKD1P6-201ENST00000343738 4769 ntBASIC19.71■□□□□ 0.75
RAB3DO95716 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3DO95716 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3DO95716 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3DO95716 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3DO95716 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3DO95716 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3DO95716 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3DO95716 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB3DO95716 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RAB3DO95716 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RAB3DO95716 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3DO95716 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3DO95716 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RAB3DO95716 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB3DO95716 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RAB3DO95716 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RAB3DO95716 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3DO95716 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
RAB3DO95716 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.7■□□□□ 0.74
RAB3DO95716 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3DO95716 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3DO95716 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3DO95716 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RAB3DO95716 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RAB3DO95716 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB3DO95716 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB3DO95716 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3DO95716 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.69■□□□□ 0.74
RAB3DO95716 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
RAB3DO95716 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3DO95716 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3DO95716 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3DO95716 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3DO95716 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB3DO95716 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
RAB3DO95716 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.68■□□□□ 0.74
RAB3DO95716 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3DO95716 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3DO95716 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RAB3DO95716 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3DO95716 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3DO95716 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3DO95716 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
RAB3DO95716 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RAB3DO95716 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB3DO95716 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB3DO95716 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB3DO95716 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3DO95716 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3DO95716 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB3DO95716 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3DO95716 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3DO95716 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB3DO95716 AL162393.1-201ENST00000437852 946 ntBASIC19.67■□□□□ 0.74
RAB3DO95716 DUX4L13-201ENST00000554103 1267 ntBASIC19.67■□□□□ 0.74
RAB3DO95716 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB3DO95716 DUX4L15-201ENST00000611059 1267 ntBASIC19.67■□□□□ 0.74
RAB3DO95716 DUX4L23-201ENST00000615195 1269 ntBASIC19.67■□□□□ 0.74
RAB3DO95716 DUX4L24-201ENST00000617576 1269 ntBASIC19.67■□□□□ 0.74
RAB3DO95716 DUX4L22-201ENST00000618238 1269 ntBASIC19.67■□□□□ 0.74
RAB3DO95716 DUX4L20-201ENST00000619712 1269 ntBASIC19.67■□□□□ 0.74
RAB3DO95716 DUX4L21-201ENST00000622058 1269 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms