Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDRT1O95170 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.71■□□□□ 0.91
CDRT1O95170 AL359504.2-201ENST00000605506 1601 ntBASIC20.71■□□□□ 0.91
CDRT1O95170 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDRT1O95170 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDRT1O95170 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.71■□□□□ 0.91
CDRT1O95170 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDRT1O95170 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDRT1O95170 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDRT1O95170 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.71■□□□□ 0.91
CDRT1O95170 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDRT1O95170 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDRT1O95170 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDRT1O95170 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDRT1O95170 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDRT1O95170 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDRT1O95170 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDRT1O95170 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.7■□□□□ 0.9
CDRT1O95170 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDRT1O95170 ZNRF2P2-203ENST00000454624 420 ntBASIC20.7■□□□□ 0.9
CDRT1O95170 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDRT1O95170 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.7■□□□□ 0.9
CDRT1O95170 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.7■□□□□ 0.9
CDRT1O95170 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDRT1O95170 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.7■□□□□ 0.9
CDRT1O95170 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDRT1O95170 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.69■□□□□ 0.9
CDRT1O95170 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CDRT1O95170 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDRT1O95170 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.69■□□□□ 0.9
CDRT1O95170 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDRT1O95170 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDRT1O95170 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.69■□□□□ 0.9
CDRT1O95170 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDRT1O95170 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDRT1O95170 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDRT1O95170 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CDRT1O95170 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDRT1O95170 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CDRT1O95170 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDRT1O95170 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.68■□□□□ 0.9
CDRT1O95170 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.68■□□□□ 0.9
CDRT1O95170 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDRT1O95170 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CDRT1O95170 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDRT1O95170 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDRT1O95170 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CDRT1O95170 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDRT1O95170 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.67■□□□□ 0.9
CDRT1O95170 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.67■□□□□ 0.9
CDRT1O95170 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDRT1O95170 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.66■□□□□ 0.9
CDRT1O95170 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDRT1O95170 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDRT1O95170 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDRT1O95170 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDRT1O95170 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.65■□□□□ 0.9
CDRT1O95170 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDRT1O95170 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.65■□□□□ 0.9
CDRT1O95170 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.65■□□□□ 0.9
CDRT1O95170 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDRT1O95170 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.65■□□□□ 0.9
CDRT1O95170 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.65■□□□□ 0.9
CDRT1O95170 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDRT1O95170 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.64■□□□□ 0.9
CDRT1O95170 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.64■□□□□ 0.9
CDRT1O95170 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDRT1O95170 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDRT1O95170 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDRT1O95170 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDRT1O95170 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CDRT1O95170 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.64■□□□□ 0.89
CDRT1O95170 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDRT1O95170 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.64■□□□□ 0.89
CDRT1O95170 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDRT1O95170 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDRT1O95170 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDRT1O95170 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.63■□□□□ 0.89
CDRT1O95170 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDRT1O95170 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDRT1O95170 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.63■□□□□ 0.89
CDRT1O95170 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.63■□□□□ 0.89
CDRT1O95170 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDRT1O95170 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CDRT1O95170 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.63■□□□□ 0.89
CDRT1O95170 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDRT1O95170 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.63■□□□□ 0.89
CDRT1O95170 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDRT1O95170 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDRT1O95170 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDRT1O95170 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDRT1O95170 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDRT1O95170 EP400NL-214ENST00000641289 2402 ntBASIC20.62■□□□□ 0.89
CDRT1O95170 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDRT1O95170 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDRT1O95170 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDRT1O95170 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.62■□□□□ 0.89
CDRT1O95170 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.62■□□□□ 0.89
CDRT1O95170 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.62■□□□□ 0.89
CDRT1O95170 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms