Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.07■□□□□ 0.96
CLPXO76031 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.07■□□□□ 0.96
CLPXO76031 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.07■□□□□ 0.96
CLPXO76031 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLPXO76031 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLPXO76031 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLPXO76031 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLPXO76031 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.06■□□□□ 0.96
CLPXO76031 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.06■□□□□ 0.96
CLPXO76031 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLPXO76031 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.06■□□□□ 0.96
CLPXO76031 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.06■□□□□ 0.96
CLPXO76031 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLPXO76031 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLPXO76031 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.06■□□□□ 0.96
CLPXO76031 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.06■□□□□ 0.96
CLPXO76031 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLPXO76031 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLPXO76031 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CLPXO76031 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CLPXO76031 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLPXO76031 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLPXO76031 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLPXO76031 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CLPXO76031 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLPXO76031 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLPXO76031 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLPXO76031 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.04■□□□□ 0.96
CLPXO76031 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
CLPXO76031 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.04■□□□□ 0.96
CLPXO76031 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.04■□□□□ 0.96
CLPXO76031 SLC25A24-204ENST00000569674 2357 ntBASIC21.03■□□□□ 0.96
CLPXO76031 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLPXO76031 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
CLPXO76031 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CLPXO76031 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLPXO76031 MIR639-201ENST00000384974 98 ntBASIC21.03■□□□□ 0.96
CLPXO76031 MIR4449-201ENST00000578365 66 ntBASIC21.03■□□□□ 0.96
CLPXO76031 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.03■□□□□ 0.96
CLPXO76031 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.03■□□□□ 0.96
CLPXO76031 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.03■□□□□ 0.96
CLPXO76031 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.03■□□□□ 0.96
CLPXO76031 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.03■□□□□ 0.96
CLPXO76031 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.02■□□□□ 0.96
CLPXO76031 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLPXO76031 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPXO76031 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.01■□□□□ 0.95
CLPXO76031 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPXO76031 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPXO76031 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPXO76031 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPXO76031 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CLPXO76031 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPXO76031 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPXO76031 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPXO76031 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPXO76031 SLC6A10P-202ENST00000431994 2058 ntBASIC21.01■□□□□ 0.95
CLPXO76031 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.01■□□□□ 0.95
CLPXO76031 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CLPXO76031 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21■□□□□ 0.95
CLPXO76031 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPXO76031 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPXO76031 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21■□□□□ 0.95
CLPXO76031 AC007375.3-201ENST00000600936 2314 ntBASIC21■□□□□ 0.95
CLPXO76031 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLPXO76031 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLPXO76031 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPXO76031 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLPXO76031 LINC00526-201ENST00000581067 1875 ntBASIC20.99■□□□□ 0.95
CLPXO76031 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.99■□□□□ 0.95
CLPXO76031 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
CLPXO76031 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CLPXO76031 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
CLPXO76031 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLPXO76031 AC127496.7-201ENST00000625110 1798 ntBASIC20.99■□□□□ 0.95
CLPXO76031 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.99■□□□□ 0.95
CLPXO76031 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLPXO76031 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLPXO76031 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLPXO76031 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.98■□□□□ 0.95
CLPXO76031 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLPXO76031 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLPXO76031 LINC01971-201ENST00000617888 1048 ntBASIC20.98■□□□□ 0.95
CLPXO76031 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPXO76031 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPXO76031 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.98■□□□□ 0.95
CLPXO76031 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPXO76031 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CLPXO76031 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPXO76031 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CLPXO76031 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.97■□□□□ 0.95
CLPXO76031 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPXO76031 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.97■□□□□ 0.95
CLPXO76031 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLPXO76031 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPXO76031 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLPXO76031 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CLPXO76031 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.96■□□□□ 0.95
CLPXO76031 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLPXO76031 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms