Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLN5O75503 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLN5O75503 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLN5O75503 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLN5O75503 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLN5O75503 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLN5O75503 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLN5O75503 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLN5O75503 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLN5O75503 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CLN5O75503 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.81■□□□□ 0.6
CLN5O75503 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
CLN5O75503 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLN5O75503 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLN5O75503 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLN5O75503 AC096887.2-201ENST00000623443 1957 ntBASIC18.81■□□□□ 0.6
CLN5O75503 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLN5O75503 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLN5O75503 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLN5O75503 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CLN5O75503 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CLN5O75503 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLN5O75503 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLN5O75503 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLN5O75503 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLN5O75503 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLN5O75503 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLN5O75503 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLN5O75503 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLN5O75503 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLN5O75503 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLN5O75503 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.8■□□□□ 0.6
CLN5O75503 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLN5O75503 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLN5O75503 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLN5O75503 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLN5O75503 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.8■□□□□ 0.6
CLN5O75503 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.8■□□□□ 0.6
CLN5O75503 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.8■□□□□ 0.6
CLN5O75503 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLN5O75503 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CLN5O75503 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLN5O75503 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.79■□□□□ 0.6
CLN5O75503 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLN5O75503 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLN5O75503 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLN5O75503 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLN5O75503 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLN5O75503 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLN5O75503 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
CLN5O75503 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLN5O75503 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.78■□□□□ 0.6
CLN5O75503 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLN5O75503 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLN5O75503 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CLN5O75503 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLN5O75503 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLN5O75503 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLN5O75503 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CLN5O75503 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.78■□□□□ 0.6
CLN5O75503 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLN5O75503 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.78■□□□□ 0.6
CLN5O75503 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.78■□□□□ 0.6
CLN5O75503 C9orf163-202ENST00000624034 2573 ntBASIC18.78■□□□□ 0.6
CLN5O75503 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLN5O75503 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLN5O75503 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLN5O75503 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLN5O75503 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLN5O75503 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLN5O75503 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLN5O75503 AL121603.2-201ENST00000557373 2117 ntBASIC18.77■□□□□ 0.6
CLN5O75503 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLN5O75503 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLN5O75503 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLN5O75503 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLN5O75503 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.76■□□□□ 0.59
CLN5O75503 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.76■□□□□ 0.59
CLN5O75503 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLN5O75503 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLN5O75503 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLN5O75503 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLN5O75503 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLN5O75503 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLN5O75503 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLN5O75503 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.75■□□□□ 0.59
CLN5O75503 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLN5O75503 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLN5O75503 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.75■□□□□ 0.59
CLN5O75503 MIR7108-201ENST00000614319 87 ntBASIC18.75■□□□□ 0.59
CLN5O75503 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLN5O75503 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.75■□□□□ 0.59
CLN5O75503 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.75■□□□□ 0.59
CLN5O75503 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLN5O75503 RNF165-205ENST00000588679 2904 ntBASIC18.74■□□□□ 0.59
CLN5O75503 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLN5O75503 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLN5O75503 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLN5O75503 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.74■□□□□ 0.59
CLN5O75503 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms