Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM3O75382 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM3O75382 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM3O75382 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.62■■□□□ 1.05
TRIM3O75382 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM3O75382 AL031848.2-201ENST00000607670 837 ntBASIC21.62■■□□□ 1.05
TRIM3O75382 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM3O75382 AC097639.1-201ENST00000565519 1891 ntBASIC21.62■■□□□ 1.05
TRIM3O75382 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM3O75382 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM3O75382 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM3O75382 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
TRIM3O75382 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TRIM3O75382 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
TRIM3O75382 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM3O75382 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM3O75382 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM3O75382 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TRIM3O75382 AL592295.1-201ENST00000400984 884 ntBASIC21.61■■□□□ 1.05
TRIM3O75382 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM3O75382 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.61■■□□□ 1.05
TRIM3O75382 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM3O75382 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM3O75382 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM3O75382 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM3O75382 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM3O75382 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TRIM3O75382 AC012676.1-201ENST00000574705 1949 ntBASIC21.6■■□□□ 1.05
TRIM3O75382 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM3O75382 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM3O75382 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
TRIM3O75382 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM3O75382 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM3O75382 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM3O75382 AL035685.1-201ENST00000636663 812 ntBASIC21.59■■□□□ 1.05
TRIM3O75382 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM3O75382 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM3O75382 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.59■■□□□ 1.05
TRIM3O75382 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.58■■□□□ 1.05
TRIM3O75382 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TRIM3O75382 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
TRIM3O75382 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM3O75382 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM3O75382 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
TRIM3O75382 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM3O75382 LINC00543-201ENST00000567234 1845 ntBASIC21.57■■□□□ 1.04
TRIM3O75382 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM3O75382 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM3O75382 KRT18P24-201ENST00000344739 1156 ntBASIC21.57■■□□□ 1.04
TRIM3O75382 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM3O75382 AC009299.2-201ENST00000482477 511 ntBASIC21.57■■□□□ 1.04
TRIM3O75382 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.57■■□□□ 1.04
TRIM3O75382 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM3O75382 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM3O75382 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM3O75382 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM3O75382 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.57■■□□□ 1.04
TRIM3O75382 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM3O75382 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM3O75382 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM3O75382 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM3O75382 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM3O75382 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM3O75382 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM3O75382 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.56■■□□□ 1.04
TRIM3O75382 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM3O75382 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM3O75382 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.55■■□□□ 1.04
TRIM3O75382 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM3O75382 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM3O75382 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM3O75382 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM3O75382 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM3O75382 FOXO3B-201ENST00000395675 1928 ntBASIC21.54■■□□□ 1.04
TRIM3O75382 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM3O75382 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM3O75382 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM3O75382 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM3O75382 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM3O75382 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM3O75382 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM3O75382 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM3O75382 AC120024.1-201ENST00000562672 995 ntBASIC21.53■■□□□ 1.04
TRIM3O75382 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TRIM3O75382 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM3O75382 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM3O75382 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM3O75382 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM3O75382 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM3O75382 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TRIM3O75382 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM3O75382 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM3O75382 THA1P-201ENST00000590384 1145 ntBASIC21.52■■□□□ 1.04
TRIM3O75382 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM3O75382 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM3O75382 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM3O75382 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TRIM3O75382 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM3O75382 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM3O75382 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms