Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM13O60858 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRIM13O60858 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
TRIM13O60858 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.95■■□□□ 1.26
TRIM13O60858 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRIM13O60858 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.95■■□□□ 1.26
TRIM13O60858 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM13O60858 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
TRIM13O60858 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM13O60858 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM13O60858 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.94■■□□□ 1.26
TRIM13O60858 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
TRIM13O60858 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM13O60858 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM13O60858 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
TRIM13O60858 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TRIM13O60858 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM13O60858 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TRIM13O60858 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM13O60858 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TRIM13O60858 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.93■■□□□ 1.26
TRIM13O60858 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
TRIM13O60858 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM13O60858 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.92■■□□□ 1.26
TRIM13O60858 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.92■■□□□ 1.26
TRIM13O60858 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM13O60858 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM13O60858 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TRIM13O60858 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
TRIM13O60858 FOXO3B-201ENST00000395675 1928 ntBASIC22.92■■□□□ 1.26
TRIM13O60858 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM13O60858 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.91■■□□□ 1.26
TRIM13O60858 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM13O60858 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.91■■□□□ 1.26
TRIM13O60858 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TRIM13O60858 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
TRIM13O60858 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM13O60858 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.9■■□□□ 1.26
TRIM13O60858 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM13O60858 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM13O60858 KRT18P10-201ENST00000388836 1287 ntBASIC22.9■■□□□ 1.26
TRIM13O60858 AC022413.1-201ENST00000624602 984 ntBASIC22.9■■□□□ 1.26
TRIM13O60858 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM13O60858 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM13O60858 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM13O60858 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TRIM13O60858 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM13O60858 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
TRIM13O60858 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TRIM13O60858 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TRIM13O60858 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.89■■□□□ 1.25
TRIM13O60858 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM13O60858 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM13O60858 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.88■■□□□ 1.25
TRIM13O60858 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
TRIM13O60858 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
TRIM13O60858 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.87■■□□□ 1.25
TRIM13O60858 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM13O60858 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM13O60858 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM13O60858 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM13O60858 MIR639-201ENST00000384974 98 ntBASIC22.87■■□□□ 1.25
TRIM13O60858 AC007029.1-201ENST00000604183 313 ntBASIC22.87■■□□□ 1.25
TRIM13O60858 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.87■■□□□ 1.25
TRIM13O60858 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM13O60858 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
TRIM13O60858 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
TRIM13O60858 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM13O60858 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TRIM13O60858 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
TRIM13O60858 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM13O60858 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
TRIM13O60858 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM13O60858 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.86■■□□□ 1.25
TRIM13O60858 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM13O60858 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM13O60858 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM13O60858 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TRIM13O60858 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM13O60858 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM13O60858 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.85■■□□□ 1.25
TRIM13O60858 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.85■■□□□ 1.25
TRIM13O60858 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM13O60858 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM13O60858 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM13O60858 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM13O60858 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM13O60858 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.85■■□□□ 1.25
TRIM13O60858 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TRIM13O60858 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM13O60858 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.84■■□□□ 1.25
TRIM13O60858 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM13O60858 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
TRIM13O60858 RAP2CP1-202ENST00000605179 643 ntBASIC22.84■■□□□ 1.25
TRIM13O60858 MIR7108-201ENST00000614319 87 ntBASIC22.84■■□□□ 1.25
TRIM13O60858 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM13O60858 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM13O60858 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TRIM13O60858 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
TRIM13O60858 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms