Protein–RNA interactions for Protein: O60635

TSPAN1, Tetraspanin-1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1O60635 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.56■■□□□ 1.68
TSPAN1O60635 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
TSPAN1O60635 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TSPAN1O60635 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.55■■□□□ 1.68
TSPAN1O60635 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.55■■□□□ 1.68
TSPAN1O60635 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.55■■□□□ 1.68
TSPAN1O60635 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TSPAN1O60635 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TSPAN1O60635 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.55■■□□□ 1.68
TSPAN1O60635 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.54■■□□□ 1.68
TSPAN1O60635 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
TSPAN1O60635 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.54■■□□□ 1.68
TSPAN1O60635 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TSPAN1O60635 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.53■■□□□ 1.68
TSPAN1O60635 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TSPAN1O60635 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TSPAN1O60635 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
TSPAN1O60635 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
TSPAN1O60635 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TSPAN1O60635 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TSPAN1O60635 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TSPAN1O60635 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.52■■□□□ 1.68
TSPAN1O60635 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TSPAN1O60635 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TSPAN1O60635 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TSPAN1O60635 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.51■■□□□ 1.67
TSPAN1O60635 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.51■■□□□ 1.67
TSPAN1O60635 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.51■■□□□ 1.67
TSPAN1O60635 AC010997.5-201ENST00000609182 354 ntBASIC25.51■■□□□ 1.67
TSPAN1O60635 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.51■■□□□ 1.67
TSPAN1O60635 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TSPAN1O60635 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
TSPAN1O60635 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TSPAN1O60635 MTDHP2-201ENST00000601468 714 ntBASIC25.5■■□□□ 1.67
TSPAN1O60635 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TSPAN1O60635 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TSPAN1O60635 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
TSPAN1O60635 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.49■■□□□ 1.67
TSPAN1O60635 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.49■■□□□ 1.67
TSPAN1O60635 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TSPAN1O60635 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.48■■□□□ 1.67
TSPAN1O60635 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TSPAN1O60635 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.48■■□□□ 1.67
TSPAN1O60635 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.48■■□□□ 1.67
TSPAN1O60635 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.47■■□□□ 1.67
TSPAN1O60635 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TSPAN1O60635 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.47■■□□□ 1.67
TSPAN1O60635 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TSPAN1O60635 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TSPAN1O60635 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.47■■□□□ 1.67
TSPAN1O60635 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.47■■□□□ 1.67
TSPAN1O60635 MIR6089-201ENST00000616698 64 ntBASIC25.47■■□□□ 1.67
TSPAN1O60635 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TSPAN1O60635 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TSPAN1O60635 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
TSPAN1O60635 SNX5-217ENST00000606557 1087 ntBASIC25.46■■□□□ 1.67
TSPAN1O60635 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.46■■□□□ 1.67
TSPAN1O60635 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TSPAN1O60635 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
TSPAN1O60635 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.45■■□□□ 1.66
TSPAN1O60635 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
TSPAN1O60635 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.45■■□□□ 1.66
TSPAN1O60635 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.45■■□□□ 1.66
TSPAN1O60635 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.45■■□□□ 1.66
TSPAN1O60635 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.45■■□□□ 1.66
TSPAN1O60635 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
TSPAN1O60635 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TSPAN1O60635 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
TSPAN1O60635 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TSPAN1O60635 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.43■■□□□ 1.66
TSPAN1O60635 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TSPAN1O60635 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TSPAN1O60635 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
TSPAN1O60635 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TSPAN1O60635 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TSPAN1O60635 MIR6724-1-201ENST00000616420 92 ntBASIC25.42■■□□□ 1.66
TSPAN1O60635 MIR6724-2-201ENST00000616483 92 ntBASIC25.42■■□□□ 1.66
TSPAN1O60635 MIR6724-4-201ENST00000617390 92 ntBASIC25.42■■□□□ 1.66
TSPAN1O60635 MIR6724-3-201ENST00000622482 92 ntBASIC25.42■■□□□ 1.66
TSPAN1O60635 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TSPAN1O60635 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
TSPAN1O60635 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
TSPAN1O60635 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TSPAN1O60635 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
TSPAN1O60635 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
TSPAN1O60635 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TSPAN1O60635 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TSPAN1O60635 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TSPAN1O60635 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.4■■□□□ 1.66
TSPAN1O60635 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
TSPAN1O60635 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.4■■□□□ 1.66
TSPAN1O60635 AL117332.1-201ENST00000622628 974 ntBASIC25.4■■□□□ 1.66
TSPAN1O60635 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TSPAN1O60635 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.4■■□□□ 1.66
TSPAN1O60635 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TSPAN1O60635 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
TSPAN1O60635 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TSPAN1O60635 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TSPAN1O60635 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.39■■□□□ 1.66
TSPAN1O60635 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms