Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 MIR6724-3-201ENST00000622482 92 ntBASIC24.87■■□□□ 1.57
TBC1D4O60343 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.86■■□□□ 1.57
TBC1D4O60343 AL117332.1-201ENST00000622628 974 ntBASIC24.86■■□□□ 1.57
TBC1D4O60343 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.86■■□□□ 1.57
TBC1D4O60343 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
TBC1D4O60343 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
TBC1D4O60343 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TBC1D4O60343 MIR3621-201ENST00000580529 85 ntBASIC24.85■■□□□ 1.57
TBC1D4O60343 MTDHP2-201ENST00000601468 714 ntBASIC24.85■■□□□ 1.57
TBC1D4O60343 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.85■■□□□ 1.57
TBC1D4O60343 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TBC1D4O60343 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TBC1D4O60343 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.84■■□□□ 1.57
TBC1D4O60343 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TBC1D4O60343 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TBC1D4O60343 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TBC1D4O60343 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
TBC1D4O60343 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
TBC1D4O60343 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TBC1D4O60343 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
TBC1D4O60343 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.82■■□□□ 1.56
TBC1D4O60343 AC131281.2-201ENST00000520478 145 ntBASIC24.82■■□□□ 1.56
TBC1D4O60343 DUSP8P4-201ENST00000399538 1761 ntBASIC24.82■■□□□ 1.56
TBC1D4O60343 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
TBC1D4O60343 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
TBC1D4O60343 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
TBC1D4O60343 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
TBC1D4O60343 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.81■■□□□ 1.56
TBC1D4O60343 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.81■■□□□ 1.56
TBC1D4O60343 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TBC1D4O60343 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TBC1D4O60343 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
TBC1D4O60343 SNX5-217ENST00000606557 1087 ntBASIC24.81■■□□□ 1.56
TBC1D4O60343 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.81■■□□□ 1.56
TBC1D4O60343 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TBC1D4O60343 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TBC1D4O60343 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TBC1D4O60343 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TBC1D4O60343 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.8■■□□□ 1.56
TBC1D4O60343 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.8■■□□□ 1.56
TBC1D4O60343 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.8■■□□□ 1.56
TBC1D4O60343 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TBC1D4O60343 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TBC1D4O60343 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.79■■□□□ 1.56
TBC1D4O60343 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
TBC1D4O60343 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TBC1D4O60343 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.79■■□□□ 1.56
TBC1D4O60343 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.79■■□□□ 1.56
TBC1D4O60343 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TBC1D4O60343 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.79■■□□□ 1.56
TBC1D4O60343 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.79■■□□□ 1.56
TBC1D4O60343 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.79■■□□□ 1.56
TBC1D4O60343 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.78■■□□□ 1.56
TBC1D4O60343 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.78■■□□□ 1.56
TBC1D4O60343 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TBC1D4O60343 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.78■■□□□ 1.56
TBC1D4O60343 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
TBC1D4O60343 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TBC1D4O60343 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TBC1D4O60343 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TBC1D4O60343 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.77■■□□□ 1.56
TBC1D4O60343 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TBC1D4O60343 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TBC1D4O60343 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.77■■□□□ 1.56
TBC1D4O60343 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.77■■□□□ 1.56
TBC1D4O60343 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.77■■□□□ 1.56
TBC1D4O60343 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TBC1D4O60343 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.76■■□□□ 1.55
TBC1D4O60343 MIR6722-201ENST00000617286 78 ntBASIC24.76■■□□□ 1.55
TBC1D4O60343 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.76■■□□□ 1.55
TBC1D4O60343 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
TBC1D4O60343 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
TBC1D4O60343 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TBC1D4O60343 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TBC1D4O60343 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TBC1D4O60343 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.75■■□□□ 1.55
TBC1D4O60343 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.75■■□□□ 1.55
TBC1D4O60343 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.75■■□□□ 1.55
TBC1D4O60343 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
TBC1D4O60343 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.75■■□□□ 1.55
TBC1D4O60343 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TBC1D4O60343 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TBC1D4O60343 AC091060.1-201ENST00000623524 1766 ntBASIC24.75■■□□□ 1.55
TBC1D4O60343 SLC6A10P-202ENST00000431994 2058 ntBASIC24.74■■□□□ 1.55
TBC1D4O60343 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
TBC1D4O60343 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.74■■□□□ 1.55
TBC1D4O60343 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.74■■□□□ 1.55
TBC1D4O60343 AL356740.2-201ENST00000601559 647 ntBASIC24.74■■□□□ 1.55
TBC1D4O60343 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TBC1D4O60343 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TBC1D4O60343 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TBC1D4O60343 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
TBC1D4O60343 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TBC1D4O60343 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TBC1D4O60343 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TBC1D4O60343 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TBC1D4O60343 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TBC1D4O60343 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
TBC1D4O60343 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.73■■□□□ 1.55
TBC1D4O60343 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms