Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC28.06■■■□□ 2.08
FOXN1O15353 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC28.06■■■□□ 2.08
FOXN1O15353 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
FOXN1O15353 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
FOXN1O15353 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
FOXN1O15353 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
FOXN1O15353 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
FOXN1O15353 ID1-201ENST00000376105 1233 ntBASIC28.04■■■□□ 2.08
FOXN1O15353 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
FOXN1O15353 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.04■■■□□ 2.08
FOXN1O15353 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
FOXN1O15353 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
FOXN1O15353 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
FOXN1O15353 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
FOXN1O15353 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
FOXN1O15353 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
FOXN1O15353 AL449106.1-201ENST00000608517 1980 ntBASIC28.01■■■□□ 2.07
FOXN1O15353 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC28.01■■■□□ 2.07
FOXN1O15353 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
FOXN1O15353 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
FOXN1O15353 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
FOXN1O15353 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
FOXN1O15353 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
FOXN1O15353 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.01■■■□□ 2.07
FOXN1O15353 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
FOXN1O15353 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC28■■■□□ 2.07
FOXN1O15353 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28■■■□□ 2.07
FOXN1O15353 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28■■■□□ 2.07
FOXN1O15353 GRAMD4P4-201ENST00000613563 1115 ntBASIC28■■■□□ 2.07
FOXN1O15353 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
FOXN1O15353 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
FOXN1O15353 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.99■■■□□ 2.07
FOXN1O15353 MIR939-201ENST00000401314 82 ntBASIC27.99■■■□□ 2.07
FOXN1O15353 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC27.99■■■□□ 2.07
FOXN1O15353 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC27.99■■■□□ 2.07
FOXN1O15353 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC27.99■■■□□ 2.07
FOXN1O15353 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
FOXN1O15353 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.98■■■□□ 2.07
FOXN1O15353 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.98■■■□□ 2.07
FOXN1O15353 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC27.98■■■□□ 2.07
FOXN1O15353 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC27.98■■■□□ 2.07
FOXN1O15353 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.98■■■□□ 2.07
FOXN1O15353 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.97■■■□□ 2.07
FOXN1O15353 AL137784.2-201ENST00000607332 1000 ntBASIC27.97■■■□□ 2.07
FOXN1O15353 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.97■■■□□ 2.07
FOXN1O15353 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
FOXN1O15353 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.96■■■□□ 2.07
FOXN1O15353 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.96■■■□□ 2.07
FOXN1O15353 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC27.96■■■□□ 2.07
FOXN1O15353 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
FOXN1O15353 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.96■■■□□ 2.07
FOXN1O15353 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
FOXN1O15353 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
FOXN1O15353 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.07
FOXN1O15353 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.95■■■□□ 2.07
FOXN1O15353 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
FOXN1O15353 AC022517.1-201ENST00000592429 346 ntBASIC27.95■■■□□ 2.06
FOXN1O15353 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
FOXN1O15353 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
FOXN1O15353 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
FOXN1O15353 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
FOXN1O15353 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
FOXN1O15353 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
FOXN1O15353 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
FOXN1O15353 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
FOXN1O15353 AP001330.3-201ENST00000520123 633 ntBASIC27.94■■■□□ 2.06
FOXN1O15353 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
FOXN1O15353 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.93■■■□□ 2.06
FOXN1O15353 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
FOXN1O15353 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
FOXN1O15353 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
FOXN1O15353 AC091060.1-201ENST00000623524 1766 ntBASIC27.93■■■□□ 2.06
FOXN1O15353 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.92■■■□□ 2.06
FOXN1O15353 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.91■■■□□ 2.06
FOXN1O15353 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
FOXN1O15353 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
FOXN1O15353 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
FOXN1O15353 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
FOXN1O15353 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
FOXN1O15353 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.9■■■□□ 2.06
FOXN1O15353 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.9■■■□□ 2.06
FOXN1O15353 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.9■■■□□ 2.06
FOXN1O15353 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC27.9■■■□□ 2.06
FOXN1O15353 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
FOXN1O15353 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.89■■■□□ 2.06
FOXN1O15353 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
FOXN1O15353 KRT18P10-201ENST00000388836 1287 ntBASIC27.89■■■□□ 2.06
FOXN1O15353 AC091305.1-201ENST00000479476 895 ntBASIC27.89■■■□□ 2.06
FOXN1O15353 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
FOXN1O15353 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
FOXN1O15353 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.89■■■□□ 2.06
FOXN1O15353 AP004609.3-201ENST00000610705 1884 ntBASIC27.89■■■□□ 2.05
FOXN1O15353 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
FOXN1O15353 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.89■■■□□ 2.05
FOXN1O15353 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.88■■■□□ 2.05
FOXN1O15353 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.88■■■□□ 2.05
FOXN1O15353 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
FOXN1O15353 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.88■■■□□ 2.05
FOXN1O15353 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
FOXN1O15353 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC27.87■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms