Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.91■■■□□ 2.54
APAF1O14727 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.91■■■□□ 2.54
APAF1O14727 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
APAF1O14727 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.9■■■□□ 2.54
APAF1O14727 AC103724.3-201ENST00000564481 992 ntBASIC30.9■■■□□ 2.54
APAF1O14727 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.9■■■□□ 2.54
APAF1O14727 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
APAF1O14727 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC30.89■■■□□ 2.54
APAF1O14727 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
APAF1O14727 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
APAF1O14727 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.89■■■□□ 2.54
APAF1O14727 RARRES2P1-201ENST00000474487 481 ntBASIC30.89■■■□□ 2.54
APAF1O14727 AC120024.1-201ENST00000562672 995 ntBASIC30.89■■■□□ 2.54
APAF1O14727 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.53
APAF1O14727 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
APAF1O14727 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC30.88■■■□□ 2.53
APAF1O14727 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
APAF1O14727 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
APAF1O14727 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
APAF1O14727 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
APAF1O14727 YBX1P4-201ENST00000392794 808 ntBASIC30.86■■■□□ 2.53
APAF1O14727 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.86■■■□□ 2.53
APAF1O14727 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
APAF1O14727 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
APAF1O14727 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.86■■■□□ 2.53
APAF1O14727 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
APAF1O14727 AL139125.2-201ENST00000623134 1869 ntBASIC30.86■■■□□ 2.53
APAF1O14727 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
APAF1O14727 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
APAF1O14727 AC135731.1-201ENST00000569415 2548 ntBASIC30.85■■■□□ 2.53
APAF1O14727 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
APAF1O14727 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
APAF1O14727 KRT18P24-201ENST00000344739 1156 ntBASIC30.85■■■□□ 2.53
APAF1O14727 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
APAF1O14727 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
APAF1O14727 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
APAF1O14727 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
APAF1O14727 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
APAF1O14727 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
APAF1O14727 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
APAF1O14727 TMEM202-AS1-202ENST00000565181 2325 ntBASIC30.83■■■□□ 2.53
APAF1O14727 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
APAF1O14727 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
APAF1O14727 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
APAF1O14727 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC30.82■■■□□ 2.52
APAF1O14727 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
APAF1O14727 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
APAF1O14727 HLA-L-211ENST00000482052 1765 ntBASIC30.82■■■□□ 2.52
APAF1O14727 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC30.82■■■□□ 2.52
APAF1O14727 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
APAF1O14727 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC30.81■■■□□ 2.52
APAF1O14727 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.81■■■□□ 2.52
APAF1O14727 AC011551.1-201ENST00000614101 683 ntBASIC30.81■■■□□ 2.52
APAF1O14727 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC30.81■■■□□ 2.52
APAF1O14727 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.81■■■□□ 2.52
APAF1O14727 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC30.8■■■□□ 2.52
APAF1O14727 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
APAF1O14727 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.8■■■□□ 2.52
APAF1O14727 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
APAF1O14727 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.79■■■□□ 2.52
APAF1O14727 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC30.79■■■□□ 2.52
APAF1O14727 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.79■■■□□ 2.52
APAF1O14727 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
APAF1O14727 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
APAF1O14727 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
APAF1O14727 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
APAF1O14727 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
APAF1O14727 THA1P-201ENST00000590384 1145 ntBASIC30.78■■■□□ 2.52
APAF1O14727 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC30.78■■■□□ 2.52
APAF1O14727 EED-207ENST00000528180 1745 ntTSL 5 BASIC30.78■■■□□ 2.52
APAF1O14727 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
APAF1O14727 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
APAF1O14727 PREB-202ENST00000406567 1910 ntTSL 5 BASIC30.77■■■□□ 2.52
APAF1O14727 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.77■■■□□ 2.52
APAF1O14727 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
APAF1O14727 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
APAF1O14727 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
APAF1O14727 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
APAF1O14727 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.75■■■□□ 2.51
APAF1O14727 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC30.75■■■□□ 2.51
APAF1O14727 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC30.75■■■□□ 2.51
APAF1O14727 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
APAF1O14727 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.75■■■□□ 2.51
APAF1O14727 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
APAF1O14727 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.74■■■□□ 2.51
APAF1O14727 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.74■■■□□ 2.51
APAF1O14727 MIR4281-201ENST00000580852 62 ntBASIC30.74■■■□□ 2.51
APAF1O14727 AL031848.2-201ENST00000607670 837 ntBASIC30.74■■■□□ 2.51
APAF1O14727 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
APAF1O14727 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
APAF1O14727 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
APAF1O14727 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
APAF1O14727 LINC01124-201ENST00000409786 2117 ntBASIC30.73■■■□□ 2.51
APAF1O14727 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.73■■■□□ 2.51
APAF1O14727 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
APAF1O14727 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
APAF1O14727 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
APAF1O14727 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
APAF1O14727 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.72■■■□□ 2.51
APAF1O14727 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms