Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
CHD2O14647 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC33.15■■■□□ 2.9
CHD2O14647 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
CHD2O14647 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC33.15■■■□□ 2.9
CHD2O14647 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
CHD2O14647 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
CHD2O14647 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC33.13■■■□□ 2.89
CHD2O14647 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC33.13■■■□□ 2.89
CHD2O14647 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CHD2O14647 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CHD2O14647 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
CHD2O14647 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
CHD2O14647 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CHD2O14647 MAG-206ENST00000597035 542 ntTSL 4 BASIC33.12■■■□□ 2.89
CHD2O14647 CA15P2-201ENST00000611168 834 ntBASIC33.12■■■□□ 2.89
CHD2O14647 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC33.12■■■□□ 2.89
CHD2O14647 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC33.12■■■□□ 2.89
CHD2O14647 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC33.12■■■□□ 2.89
CHD2O14647 MIR4767-201ENST00000582827 78 ntBASIC33.12■■■□□ 2.89
CHD2O14647 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CHD2O14647 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
CHD2O14647 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CHD2O14647 RASA4CP-201ENST00000424092 1398 ntBASIC33.11■■■□□ 2.89
CHD2O14647 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CHD2O14647 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CHD2O14647 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CHD2O14647 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
CHD2O14647 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CHD2O14647 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC33.1■■■□□ 2.89
CHD2O14647 AC090877.2-201ENST00000558441 1738 ntBASIC33.1■■■□□ 2.89
CHD2O14647 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC33.1■■■□□ 2.89
CHD2O14647 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
CHD2O14647 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CHD2O14647 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC33.09■■■□□ 2.89
CHD2O14647 AC090192.1-201ENST00000517740 490 ntBASIC33.09■■■□□ 2.89
CHD2O14647 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CHD2O14647 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC33.09■■■□□ 2.89
CHD2O14647 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
CHD2O14647 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC33.08■■■□□ 2.89
CHD2O14647 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CHD2O14647 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
CHD2O14647 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.89
CHD2O14647 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
CHD2O14647 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.89
CHD2O14647 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
CHD2O14647 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
CHD2O14647 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC33.07■■■□□ 2.88
CHD2O14647 PTCHD3P2-201ENST00000424937 1205 ntBASIC33.07■■■□□ 2.88
CHD2O14647 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CHD2O14647 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CHD2O14647 AC027682.1-201ENST00000562846 899 ntBASIC33.06■■■□□ 2.88
CHD2O14647 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC33.06■■■□□ 2.88
CHD2O14647 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC33.05■■■□□ 2.88
CHD2O14647 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC33.05■■■□□ 2.88
CHD2O14647 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC33.05■■■□□ 2.88
CHD2O14647 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CHD2O14647 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC33.05■■■□□ 2.88
CHD2O14647 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
CHD2O14647 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC33.04■■■□□ 2.88
CHD2O14647 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CHD2O14647 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC33.04■■■□□ 2.88
CHD2O14647 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC33.04■■■□□ 2.88
CHD2O14647 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC33.03■■■□□ 2.88
CHD2O14647 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC33.03■■■□□ 2.88
CHD2O14647 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CHD2O14647 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC33.02■■■□□ 2.88
CHD2O14647 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CHD2O14647 AC004448.1-201ENST00000458332 883 ntBASIC33.02■■■□□ 2.88
CHD2O14647 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC33.02■■■□□ 2.88
CHD2O14647 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CHD2O14647 RHOF-204ENST00000537265 699 ntTSL 2 BASIC33.02■■■□□ 2.88
CHD2O14647 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC33.02■■■□□ 2.88
CHD2O14647 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC33.01■■■□□ 2.88
CHD2O14647 SERBP1P1-201ENST00000396021 1160 ntBASIC33.01■■■□□ 2.87
CHD2O14647 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CHD2O14647 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC33.01■■■□□ 2.87
CHD2O14647 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
CHD2O14647 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CHD2O14647 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
CHD2O14647 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC33■■■□□ 2.87
CHD2O14647 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
CHD2O14647 AC011298.3-201ENST00000615796 283 ntBASIC33■■■□□ 2.87
CHD2O14647 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC33■■■□□ 2.87
CHD2O14647 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC33■■■□□ 2.87
CHD2O14647 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC33■■■□□ 2.87
CHD2O14647 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC33■■■□□ 2.87
CHD2O14647 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC33■■■□□ 2.87
CHD2O14647 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC33■■■□□ 2.87
CHD2O14647 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CHD2O14647 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
CHD2O14647 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CHD2O14647 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC32.99■■■□□ 2.87
CHD2O14647 JTB-203ENST00000368589 1216 ntTSL 2 BASIC32.98■■■□□ 2.87
CHD2O14647 RARRES2P11-201ENST00000635158 484 ntBASIC32.98■■■□□ 2.87
CHD2O14647 ST7-202ENST00000323984 2142 ntTSL 5 BASIC32.98■■■□□ 2.87
CHD2O14647 ST7-207ENST00000393449 2127 ntTSL 5 BASIC32.98■■■□□ 2.87
CHD2O14647 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC32.98■■■□□ 2.87
CHD2O14647 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
CHD2O14647 GLI3-203ENST00000437480 451 ntTSL 2 BASIC32.98■■■□□ 2.87
CHD2O14647 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC32.98■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms