Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
LST1O00453 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LST1O00453 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LST1O00453 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LST1O00453 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LST1O00453 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LST1O00453 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LST1O00453 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.2■□□□□ 0.02
LST1O00453 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LST1O00453 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
LST1O00453 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LST1O00453 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LST1O00453 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.2■□□□□ 0.02
LST1O00453 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC15.2■□□□□ 0.02
LST1O00453 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LST1O00453 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
LST1O00453 GUSBP5-202ENST00000510805 1989 ntBASIC15.2■□□□□ 0.02
LST1O00453 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LST1O00453 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
LST1O00453 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LST1O00453 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.2■□□□□ 0.02
LST1O00453 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LST1O00453 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LST1O00453 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LST1O00453 AL133380.1-201ENST00000506013 324 ntBASIC15.19■□□□□ 0.02
LST1O00453 ECEL1P1-201ENST00000373592 1742 ntBASIC15.19■□□□□ 0.02
LST1O00453 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LST1O00453 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LST1O00453 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LST1O00453 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LST1O00453 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LST1O00453 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LST1O00453 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.18■□□□□ 0.02
LST1O00453 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LST1O00453 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LST1O00453 AL137060.1-201ENST00000618151 2648 ntBASIC15.18■□□□□ 0.02
LST1O00453 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LST1O00453 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LST1O00453 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LST1O00453 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LST1O00453 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LST1O00453 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LST1O00453 SLC6A10P-202ENST00000431994 2058 ntBASIC15.17■□□□□ 0.02
LST1O00453 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LST1O00453 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.17■□□□□ 0.02
LST1O00453 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LST1O00453 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LST1O00453 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.16■□□□□ 0.02
LST1O00453 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LST1O00453 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC15.16■□□□□ 0.02
LST1O00453 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC15.16■□□□□ 0.02
LST1O00453 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LST1O00453 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.16■□□□□ 0.02
LST1O00453 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LST1O00453 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LST1O00453 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
LST1O00453 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LST1O00453 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LST1O00453 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
LST1O00453 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
LST1O00453 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LST1O00453 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LST1O00453 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LST1O00453 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LST1O00453 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LST1O00453 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC15.14■□□□□ 0.01
LST1O00453 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LST1O00453 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.14■□□□□ 0.01
LST1O00453 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC15.14■□□□□ 0.01
LST1O00453 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LST1O00453 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LST1O00453 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LST1O00453 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LST1O00453 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
LST1O00453 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LST1O00453 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LST1O00453 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LST1O00453 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LST1O00453 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.14■□□□□ 0.01
LST1O00453 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LST1O00453 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.14■□□□□ 0.01
LST1O00453 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LST1O00453 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LST1O00453 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LST1O00453 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LST1O00453 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LST1O00453 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LST1O00453 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.13■□□□□ 0.01
LST1O00453 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LST1O00453 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LST1O00453 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LST1O00453 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LST1O00453 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC15.13■□□□□ 0.01
LST1O00453 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC15.13■□□□□ 0.01
LST1O00453 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LST1O00453 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LST1O00453 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LST1O00453 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LST1O00453 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LST1O00453 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 1142.8 ms