Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 EDA-201ENST00000338901 1233 ntBASIC23.89■■□□□ 1.41
SHISA7A6NL88 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
SHISA7A6NL88 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
SHISA7A6NL88 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SHISA7A6NL88 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
SHISA7A6NL88 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHISA7A6NL88 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHISA7A6NL88 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
SHISA7A6NL88 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.88■■□□□ 1.41
SHISA7A6NL88 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.88■■□□□ 1.41
SHISA7A6NL88 AL136967.2-201ENST00000623968 743 ntBASIC23.88■■□□□ 1.41
SHISA7A6NL88 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.88■■□□□ 1.41
SHISA7A6NL88 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHISA7A6NL88 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.87■■□□□ 1.41
SHISA7A6NL88 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SHISA7A6NL88 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.87■■□□□ 1.41
SHISA7A6NL88 AL355001.2-201ENST00000620617 1191 ntBASIC23.87■■□□□ 1.41
SHISA7A6NL88 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHISA7A6NL88 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHISA7A6NL88 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.86■■□□□ 1.41
SHISA7A6NL88 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.86■■□□□ 1.41
SHISA7A6NL88 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHISA7A6NL88 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
SHISA7A6NL88 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.86■■□□□ 1.41
SHISA7A6NL88 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHISA7A6NL88 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.86■■□□□ 1.41
SHISA7A6NL88 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SHISA7A6NL88 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.86■■□□□ 1.41
SHISA7A6NL88 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.86■■□□□ 1.41
SHISA7A6NL88 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.85■■□□□ 1.41
SHISA7A6NL88 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.85■■□□□ 1.41
SHISA7A6NL88 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHISA7A6NL88 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHISA7A6NL88 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHISA7A6NL88 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHISA7A6NL88 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.84■■□□□ 1.41
SHISA7A6NL88 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHISA7A6NL88 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHISA7A6NL88 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.84■■□□□ 1.41
SHISA7A6NL88 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHISA7A6NL88 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.84■■□□□ 1.41
SHISA7A6NL88 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.84■■□□□ 1.41
SHISA7A6NL88 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SHISA7A6NL88 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.83■■□□□ 1.41
SHISA7A6NL88 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SHISA7A6NL88 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
SHISA7A6NL88 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SHISA7A6NL88 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.83■■□□□ 1.41
SHISA7A6NL88 SRD5A1P1-201ENST00000442297 786 ntBASIC23.83■■□□□ 1.41
SHISA7A6NL88 AC105265.2-201ENST00000467189 838 ntBASIC23.83■■□□□ 1.41
SHISA7A6NL88 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SHISA7A6NL88 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.83■■□□□ 1.4
SHISA7A6NL88 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHISA7A6NL88 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHISA7A6NL88 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SHISA7A6NL88 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHISA7A6NL88 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.82■■□□□ 1.4
SHISA7A6NL88 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.81■■□□□ 1.4
SHISA7A6NL88 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SHISA7A6NL88 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SHISA7A6NL88 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SHISA7A6NL88 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.81■■□□□ 1.4
SHISA7A6NL88 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.81■■□□□ 1.4
SHISA7A6NL88 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SHISA7A6NL88 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.81■■□□□ 1.4
SHISA7A6NL88 AC104564.3-201ENST00000582367 638 ntBASIC23.81■■□□□ 1.4
SHISA7A6NL88 MIR5787-201ENST00000611784 55 ntBASIC23.81■■□□□ 1.4
SHISA7A6NL88 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
SHISA7A6NL88 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.81■■□□□ 1.4
SHISA7A6NL88 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.8■■□□□ 1.4
SHISA7A6NL88 MIR939-201ENST00000401314 82 ntBASIC23.8■■□□□ 1.4
SHISA7A6NL88 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SHISA7A6NL88 AF213884.3-201ENST00000563833 479 ntBASIC23.8■■□□□ 1.4
SHISA7A6NL88 AC142086.6-201ENST00000621154 1765 ntBASIC23.8■■□□□ 1.4
SHISA7A6NL88 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
SHISA7A6NL88 AC096887.2-201ENST00000623443 1957 ntBASIC23.8■■□□□ 1.4
SHISA7A6NL88 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHISA7A6NL88 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHISA7A6NL88 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SHISA7A6NL88 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHISA7A6NL88 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
SHISA7A6NL88 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SHISA7A6NL88 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SHISA7A6NL88 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHISA7A6NL88 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHISA7A6NL88 AP001330.3-201ENST00000520123 633 ntBASIC23.78■■□□□ 1.4
SHISA7A6NL88 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SHISA7A6NL88 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SHISA7A6NL88 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SHISA7A6NL88 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.77■■□□□ 1.4
SHISA7A6NL88 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.77■■□□□ 1.4
SHISA7A6NL88 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.77■■□□□ 1.4
SHISA7A6NL88 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHISA7A6NL88 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.76■■□□□ 1.39
SHISA7A6NL88 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SHISA7A6NL88 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SHISA7A6NL88 AC004448.1-201ENST00000458332 883 ntBASIC23.76■■□□□ 1.39
SHISA7A6NL88 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.76■■□□□ 1.39
SHISA7A6NL88 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.76■■□□□ 1.39
SHISA7A6NL88 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms