Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRBV6-4A0A1B0GX49 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-4A0A1B0GX49 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-4A0A1B0GX49 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-4A0A1B0GX49 KRT18P60-201ENST00000312876 1297 ntBASIC16.45■□□□□ 0.22
TRBV6-4A0A1B0GX49 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-4A0A1B0GX49 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.45■□□□□ 0.22
TRBV6-4A0A1B0GX49 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-4A0A1B0GX49 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-4A0A1B0GX49 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-4A0A1B0GX49 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-4A0A1B0GX49 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-4A0A1B0GX49 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBV6-4A0A1B0GX49 HLA-L-211ENST00000482052 1765 ntBASIC16.44■□□□□ 0.22
TRBV6-4A0A1B0GX49 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBV6-4A0A1B0GX49 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-4A0A1B0GX49 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-4A0A1B0GX49 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-4A0A1B0GX49 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.44■□□□□ 0.22
TRBV6-4A0A1B0GX49 NTF6A-201ENST00000591175 560 ntBASIC16.44■□□□□ 0.22
TRBV6-4A0A1B0GX49 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV6-4A0A1B0GX49 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-4A0A1B0GX49 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV6-4A0A1B0GX49 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-4A0A1B0GX49 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-4A0A1B0GX49 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-4A0A1B0GX49 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-4A0A1B0GX49 LONRF2P2-201ENST00000439212 571 ntBASIC16.43■□□□□ 0.22
TRBV6-4A0A1B0GX49 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-4A0A1B0GX49 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-4A0A1B0GX49 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV6-4A0A1B0GX49 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-4A0A1B0GX49 AC090877.2-201ENST00000558441 1738 ntBASIC16.42■□□□□ 0.22
TRBV6-4A0A1B0GX49 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-4A0A1B0GX49 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-4A0A1B0GX49 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV6-4A0A1B0GX49 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV6-4A0A1B0GX49 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-4A0A1B0GX49 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-4A0A1B0GX49 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRBV6-4A0A1B0GX49 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-4A0A1B0GX49 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-4A0A1B0GX49 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV6-4A0A1B0GX49 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-4A0A1B0GX49 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-4A0A1B0GX49 AC019171.1-201ENST00000601251 1056 ntBASIC16.4■□□□□ 0.22
TRBV6-4A0A1B0GX49 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TRBV6-4A0A1B0GX49 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-4A0A1B0GX49 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-4A0A1B0GX49 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.4■□□□□ 0.22
TRBV6-4A0A1B0GX49 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-4A0A1B0GX49 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.39■□□□□ 0.22
TRBV6-4A0A1B0GX49 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-4A0A1B0GX49 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRBV6-4A0A1B0GX49 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-4A0A1B0GX49 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-4A0A1B0GX49 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-4A0A1B0GX49 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-4A0A1B0GX49 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.39■□□□□ 0.21
TRBV6-4A0A1B0GX49 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-4A0A1B0GX49 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-4A0A1B0GX49 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 AC139795.1-202ENST00000500444 432 ntBASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 AC022616.5-201ENST00000518796 181 ntBASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-4A0A1B0GX49 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV6-4A0A1B0GX49 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBV6-4A0A1B0GX49 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-4A0A1B0GX49 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBV6-4A0A1B0GX49 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
TRBV6-4A0A1B0GX49 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-4A0A1B0GX49 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-4A0A1B0GX49 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRBV6-4A0A1B0GX49 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms