Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV7-9A0A0J9YWB2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV7-9A0A0J9YWB2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV7-9A0A0J9YWB2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV7-9A0A0J9YWB2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV7-9A0A0J9YWB2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV7-9A0A0J9YWB2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRBV7-9A0A0J9YWB2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV7-9A0A0J9YWB2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV7-9A0A0J9YWB2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV7-9A0A0J9YWB2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV7-9A0A0J9YWB2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV7-9A0A0J9YWB2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TRBV7-9A0A0J9YWB2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
TRBV7-9A0A0J9YWB2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
TRBV7-9A0A0J9YWB2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV7-9A0A0J9YWB2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.33■□□□□ 0.36
TRBV7-9A0A0J9YWB2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.33■□□□□ 0.36
TRBV7-9A0A0J9YWB2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV7-9A0A0J9YWB2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV7-9A0A0J9YWB2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV7-9A0A0J9YWB2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
TRBV7-9A0A0J9YWB2 MIR4449-201ENST00000578365 66 ntBASIC17.32■□□□□ 0.36
TRBV7-9A0A0J9YWB2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV7-9A0A0J9YWB2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV7-9A0A0J9YWB2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV7-9A0A0J9YWB2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV7-9A0A0J9YWB2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV7-9A0A0J9YWB2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV7-9A0A0J9YWB2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
TRBV7-9A0A0J9YWB2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV7-9A0A0J9YWB2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRBV7-9A0A0J9YWB2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRBV7-9A0A0J9YWB2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV7-9A0A0J9YWB2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV7-9A0A0J9YWB2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV7-9A0A0J9YWB2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV7-9A0A0J9YWB2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV7-9A0A0J9YWB2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV7-9A0A0J9YWB2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV7-9A0A0J9YWB2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV7-9A0A0J9YWB2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRBV7-9A0A0J9YWB2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TRBV7-9A0A0J9YWB2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV7-9A0A0J9YWB2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV7-9A0A0J9YWB2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TRBV7-9A0A0J9YWB2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV7-9A0A0J9YWB2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV7-9A0A0J9YWB2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRBV7-9A0A0J9YWB2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-9A0A0J9YWB2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRBV7-9A0A0J9YWB2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-9A0A0J9YWB2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-9A0A0J9YWB2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-9A0A0J9YWB2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-9A0A0J9YWB2 GPX1-201ENST00000419349 1106 ntBASIC17.29■□□□□ 0.36
TRBV7-9A0A0J9YWB2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV7-9A0A0J9YWB2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRBV7-9A0A0J9YWB2 HLA-L-211ENST00000482052 1765 ntBASIC17.29■□□□□ 0.36
TRBV7-9A0A0J9YWB2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRBV7-9A0A0J9YWB2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV7-9A0A0J9YWB2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV7-9A0A0J9YWB2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV7-9A0A0J9YWB2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV7-9A0A0J9YWB2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV7-9A0A0J9YWB2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRBV7-9A0A0J9YWB2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV7-9A0A0J9YWB2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV7-9A0A0J9YWB2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRBV7-9A0A0J9YWB2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV7-9A0A0J9YWB2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV7-9A0A0J9YWB2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.27■□□□□ 0.36
TRBV7-9A0A0J9YWB2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV7-9A0A0J9YWB2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRBV7-9A0A0J9YWB2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV7-9A0A0J9YWB2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.27■□□□□ 0.35
TRBV7-9A0A0J9YWB2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV7-9A0A0J9YWB2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRBV7-9A0A0J9YWB2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV7-9A0A0J9YWB2 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV7-9A0A0J9YWB2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRBV7-9A0A0J9YWB2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
TRBV7-9A0A0J9YWB2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRBV7-9A0A0J9YWB2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRBV7-9A0A0J9YWB2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV7-9A0A0J9YWB2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms