Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRAV17A0A0B4J275 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV17A0A0B4J275 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.31■■□□□ 1
TRAV17A0A0B4J275 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
TRAV17A0A0B4J275 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.31■■□□□ 1
TRAV17A0A0B4J275 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.31■■□□□ 1
TRAV17A0A0B4J275 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRAV17A0A0B4J275 AL512631.2-201ENST00000604634 923 ntBASIC21.31■■□□□ 1
TRAV17A0A0B4J275 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.31■■□□□ 1
TRAV17A0A0B4J275 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRAV17A0A0B4J275 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRAV17A0A0B4J275 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
TRAV17A0A0B4J275 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV17A0A0B4J275 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.3■■□□□ 1
TRAV17A0A0B4J275 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV17A0A0B4J275 MIR935-201ENST00000401179 91 ntBASIC21.3■■□□□ 1
TRAV17A0A0B4J275 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.3■■□□□ 1
TRAV17A0A0B4J275 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRAV17A0A0B4J275 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRAV17A0A0B4J275 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAV17A0A0B4J275 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAV17A0A0B4J275 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
TRAV17A0A0B4J275 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAV17A0A0B4J275 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV17A0A0B4J275 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV17A0A0B4J275 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAV17A0A0B4J275 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.28■■□□□ 1
TRAV17A0A0B4J275 AC096631.2-201ENST00000436136 790 ntBASIC21.28■■□□□ 1
TRAV17A0A0B4J275 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.28■■□□□ 1
TRAV17A0A0B4J275 AC110285.6-201ENST00000617652 491 ntBASIC21.28■■□□□ 1
TRAV17A0A0B4J275 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.28■■□□□ 1
TRAV17A0A0B4J275 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAV17A0A0B4J275 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TRAV17A0A0B4J275 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV17A0A0B4J275 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.27■■□□□ 1
TRAV17A0A0B4J275 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAV17A0A0B4J275 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV17A0A0B4J275 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRAV17A0A0B4J275 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
TRAV17A0A0B4J275 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV17A0A0B4J275 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAV17A0A0B4J275 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAV17A0A0B4J275 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAV17A0A0B4J275 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV17A0A0B4J275 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV17A0A0B4J275 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV17A0A0B4J275 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV17A0A0B4J275 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.25■□□□□ 0.99
TRAV17A0A0B4J275 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV17A0A0B4J275 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.25■□□□□ 0.99
TRAV17A0A0B4J275 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.24■□□□□ 0.99
TRAV17A0A0B4J275 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV17A0A0B4J275 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV17A0A0B4J275 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV17A0A0B4J275 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV17A0A0B4J275 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRAV17A0A0B4J275 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.24■□□□□ 0.99
TRAV17A0A0B4J275 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.24■□□□□ 0.99
TRAV17A0A0B4J275 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.23■□□□□ 0.99
TRAV17A0A0B4J275 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRAV17A0A0B4J275 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV17A0A0B4J275 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.23■□□□□ 0.99
TRAV17A0A0B4J275 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.23■□□□□ 0.99
TRAV17A0A0B4J275 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.23■□□□□ 0.99
TRAV17A0A0B4J275 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.22■□□□□ 0.99
TRAV17A0A0B4J275 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV17A0A0B4J275 AC133561.4-201ENST00000566112 224 ntBASIC21.22■□□□□ 0.99
TRAV17A0A0B4J275 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV17A0A0B4J275 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV17A0A0B4J275 AC092803.2-201ENST00000564287 1899 ntBASIC21.22■□□□□ 0.99
TRAV17A0A0B4J275 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV17A0A0B4J275 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV17A0A0B4J275 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV17A0A0B4J275 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.21■□□□□ 0.99
TRAV17A0A0B4J275 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.21■□□□□ 0.99
TRAV17A0A0B4J275 AC005837.3-201ENST00000612163 286 ntBASIC21.21■□□□□ 0.99
TRAV17A0A0B4J275 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.21■□□□□ 0.99
TRAV17A0A0B4J275 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.21■□□□□ 0.99
TRAV17A0A0B4J275 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TRAV17A0A0B4J275 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.21■□□□□ 0.99
TRAV17A0A0B4J275 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV17A0A0B4J275 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV17A0A0B4J275 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.2■□□□□ 0.98
TRAV17A0A0B4J275 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.2■□□□□ 0.98
TRAV17A0A0B4J275 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAV17A0A0B4J275 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV17A0A0B4J275 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV17A0A0B4J275 AC004448.1-201ENST00000458332 883 ntBASIC21.2■□□□□ 0.98
TRAV17A0A0B4J275 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV17A0A0B4J275 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.19■□□□□ 0.98
TRAV17A0A0B4J275 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV17A0A0B4J275 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.19■□□□□ 0.98
TRAV17A0A0B4J275 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
TRAV17A0A0B4J275 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV17A0A0B4J275 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TRAV17A0A0B4J275 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TRAV17A0A0B4J275 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.18■□□□□ 0.98
TRAV17A0A0B4J275 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAV17A0A0B4J275 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.18■□□□□ 0.98
TRAV17A0A0B4J275 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms