Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV2A0A0B4J234 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV2A0A0B4J234 MIR4508-201ENST00000584178 70 ntBASIC17.57■□□□□ 0.4
TRAV2A0A0B4J234 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV2A0A0B4J234 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV2A0A0B4J234 AC090877.2-201ENST00000558441 1738 ntBASIC17.56■□□□□ 0.4
TRAV2A0A0B4J234 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV2A0A0B4J234 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV2A0A0B4J234 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TRAV2A0A0B4J234 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV2A0A0B4J234 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV2A0A0B4J234 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV2A0A0B4J234 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV2A0A0B4J234 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAV2A0A0B4J234 AC010980.1-201ENST00000587192 1142 ntBASIC17.55■□□□□ 0.4
TRAV2A0A0B4J234 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV2A0A0B4J234 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV2A0A0B4J234 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV2A0A0B4J234 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV2A0A0B4J234 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 KRT18P24-201ENST00000344739 1156 ntBASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 PVT1_1.1-201ENST00000615125 194 ntBASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV2A0A0B4J234 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV2A0A0B4J234 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV2A0A0B4J234 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV2A0A0B4J234 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV2A0A0B4J234 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV2A0A0B4J234 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV2A0A0B4J234 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV2A0A0B4J234 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV2A0A0B4J234 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV2A0A0B4J234 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV2A0A0B4J234 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV2A0A0B4J234 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV2A0A0B4J234 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV2A0A0B4J234 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV2A0A0B4J234 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
TRAV2A0A0B4J234 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
TRAV2A0A0B4J234 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV2A0A0B4J234 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRAV2A0A0B4J234 YBX1P4-201ENST00000392794 808 ntBASIC17.51■□□□□ 0.39
TRAV2A0A0B4J234 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV2A0A0B4J234 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV2A0A0B4J234 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV2A0A0B4J234 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRAV2A0A0B4J234 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV2A0A0B4J234 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
TRAV2A0A0B4J234 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV2A0A0B4J234 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV2A0A0B4J234 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV2A0A0B4J234 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRAV2A0A0B4J234 AC138932.3-201ENST00000567634 1902 ntBASIC17.5■□□□□ 0.39
TRAV2A0A0B4J234 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV2A0A0B4J234 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV2A0A0B4J234 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV2A0A0B4J234 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV2A0A0B4J234 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV2A0A0B4J234 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV2A0A0B4J234 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAV2A0A0B4J234 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV2A0A0B4J234 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV2A0A0B4J234 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV2A0A0B4J234 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV2A0A0B4J234 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms