Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV20-1A0A075B6N2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV20-1A0A075B6N2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV20-1A0A075B6N2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRBV20-1A0A075B6N2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV20-1A0A075B6N2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV20-1A0A075B6N2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV20-1A0A075B6N2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV20-1A0A075B6N2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV20-1A0A075B6N2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV20-1A0A075B6N2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV20-1A0A075B6N2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRBV20-1A0A075B6N2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV20-1A0A075B6N2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV20-1A0A075B6N2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV20-1A0A075B6N2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV20-1A0A075B6N2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV20-1A0A075B6N2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRBV20-1A0A075B6N2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV20-1A0A075B6N2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV20-1A0A075B6N2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV20-1A0A075B6N2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV20-1A0A075B6N2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV20-1A0A075B6N2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV20-1A0A075B6N2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV20-1A0A075B6N2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV20-1A0A075B6N2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRBV20-1A0A075B6N2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV20-1A0A075B6N2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV20-1A0A075B6N2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV20-1A0A075B6N2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV20-1A0A075B6N2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV20-1A0A075B6N2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV20-1A0A075B6N2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV20-1A0A075B6N2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRBV20-1A0A075B6N2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV20-1A0A075B6N2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV20-1A0A075B6N2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
TRBV20-1A0A075B6N2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV20-1A0A075B6N2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV20-1A0A075B6N2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.6■□□□□ 0.09
TRBV20-1A0A075B6N2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV20-1A0A075B6N2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV20-1A0A075B6N2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV20-1A0A075B6N2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV20-1A0A075B6N2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV20-1A0A075B6N2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
TRBV20-1A0A075B6N2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRBV20-1A0A075B6N2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV20-1A0A075B6N2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV20-1A0A075B6N2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV20-1A0A075B6N2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV20-1A0A075B6N2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV20-1A0A075B6N2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV20-1A0A075B6N2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV20-1A0A075B6N2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV20-1A0A075B6N2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV20-1A0A075B6N2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TRBV20-1A0A075B6N2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRBV20-1A0A075B6N2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRBV20-1A0A075B6N2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV20-1A0A075B6N2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TRBV20-1A0A075B6N2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.58■□□□□ 0.09
TRBV20-1A0A075B6N2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRBV20-1A0A075B6N2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV20-1A0A075B6N2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV20-1A0A075B6N2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV20-1A0A075B6N2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRBV20-1A0A075B6N2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV20-1A0A075B6N2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRBV20-1A0A075B6N2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV20-1A0A075B6N2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV20-1A0A075B6N2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRBV20-1A0A075B6N2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV20-1A0A075B6N2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRBV20-1A0A075B6N2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV20-1A0A075B6N2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV20-1A0A075B6N2 WASH5P-204ENST00000632292 975 ntBASIC15.57■□□□□ 0.08
TRBV20-1A0A075B6N2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRBV20-1A0A075B6N2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV20-1A0A075B6N2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.56■□□□□ 0.08
TRBV20-1A0A075B6N2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV20-1A0A075B6N2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV20-1A0A075B6N2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV20-1A0A075B6N2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV20-1A0A075B6N2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms