Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 AC112693.3-201ENST00000624819 1983 ntBASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.24■□□□□ 0.03
AP4B1Q9Y6B7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 AC117489.1-201ENST00000625169 3217 ntBASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 AC079781.5-202ENST00000641784 3743 ntBASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 AC023274.1-201ENST00000418278 595 ntBASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 HCG4-201ENST00000418983 998 ntBASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 BX842568.4-201ENST00000421222 227 ntBASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 DNAJB3-201ENST00000446806 729 ntBASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 MIR4515-201ENST00000584082 81 ntBASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 MTDHP5-201ENST00000598980 586 ntBASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
AP4B1Q9Y6B7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 MCCD1P2-201ENST00000423228 335 ntBASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 PDPK2P-202ENST00000562415 1191 ntBASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 AL031432.2-201ENST00000566714 459 ntBASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 AL928711.1-201ENST00000570165 459 ntBASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 AP001350.2-201ENST00000625104 1094 ntBASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 AC025580.3-201ENST00000617932 1424 ntBASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 AC008677.1-201ENST00000519230 1561 ntBASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP4B1Q9Y6B7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 C18orf15-201ENST00000623680 2534 ntBASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP4B1Q9Y6B7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms