Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 SPDYE18-201ENST00000510091 1050 ntBASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 AC092337.1-201ENST00000568699 1129 ntBASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 AC008494.3-201ENST00000606615 944 ntBASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 AC099568.2-201ENST00000609194 695 ntBASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 AL691432.1-201ENST00000596308 1422 ntBASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 NORAD-201ENST00000565493 5339 ntBASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TSSC4Q9Y5U2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 CICP4-201ENST00000447359 2812 ntBASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 OR8S1-201ENST00000310194 1080 ntBASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 DGCR5-201ENST00000399539 862 ntBASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 RRP7BP-205ENST00000566851 833 ntBASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 AC025048.3-201ENST00000590609 569 ntBASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 AC005702.4-201ENST00000618393 416 ntBASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.41□□□□□ -0.42
TSSC4Q9Y5U2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.4□□□□□ -0.42
TSSC4Q9Y5U2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TSSC4Q9Y5U2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TSSC4Q9Y5U2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms