Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 AC003101.2-201ENST00000612557 442 ntBASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 AL035456.1-201ENST00000456064 1369 ntBASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGA11Q9Y5H2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA11Q9Y5H2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA11Q9Y5H2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDHGA11Q9Y5H2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.33■□□□□ 0.05
PCDHGA11Q9Y5H2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA11Q9Y5H2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA11Q9Y5H2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA11Q9Y5H2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA11Q9Y5H2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA11Q9Y5H2 AL009178.2-201ENST00000597278 2719 ntBASIC15.33■□□□□ 0.05
PCDHGA11Q9Y5H2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGA11Q9Y5H2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PCDHGA11Q9Y5H2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 SPDYE14P-201ENST00000442619 822 ntBASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 AP006288.1-201ENST00000446065 395 ntBASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 AC026150.2-201ENST00000564693 1156 ntBASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 AC007967.4-201ENST00000614700 386 ntBASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA11Q9Y5H2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA11Q9Y5H2 TMBIM7P-203ENST00000641617 1718 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms