Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 AL513523.2-202ENST00000427283 2040 ntBASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
DENND2AQ9ULE3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 PAUPAR-201ENST00000630360 2965 ntBASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 AC018665.1-201ENST00000622927 1362 ntBASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 BOLA2P3-201ENST00000404566 256 ntBASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 PTP4A1P2-201ENST00000546033 454 ntBASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 AC093813.1-201ENST00000605066 256 ntBASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DENND2AQ9ULE3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 MIR658-201ENST00000385210 100 ntBASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 CROCCP4-201ENST00000457096 498 ntBASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 AC009486.1-201ENST00000569860 813 ntBASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
DENND2AQ9ULE3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DENND2AQ9ULE3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
DENND2AQ9ULE3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
DENND2AQ9ULE3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
DENND2AQ9ULE3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.95■□□□□ 0.62
DENND2AQ9ULE3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DENND2AQ9ULE3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.95■□□□□ 0.62
DENND2AQ9ULE3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.95■□□□□ 0.62
DENND2AQ9ULE3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DENND2AQ9ULE3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms