Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 CHMP4BP1-201ENST00000556017 588 ntBASIC19.8■□□□□ 0.76
SCN11AQ9UI33 AC105129.2-201ENST00000559536 390 ntBASIC19.8■□□□□ 0.76
SCN11AQ9UI33 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.8■□□□□ 0.76
SCN11AQ9UI33 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 AL513523.2-202ENST00000427283 2040 ntBASIC19.79■□□□□ 0.76
SCN11AQ9UI33 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN11AQ9UI33 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.78■□□□□ 0.76
SCN11AQ9UI33 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 MST1L-201ENST00000442552 2185 ntBASIC19.78■□□□□ 0.76
SCN11AQ9UI33 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 AC138649.2-201ENST00000615886 705 ntBASIC19.78■□□□□ 0.76
SCN11AQ9UI33 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 FTLP10-202ENST00000505798 471 ntBASIC19.78■□□□□ 0.76
SCN11AQ9UI33 AC022217.1-201ENST00000521069 738 ntBASIC19.78■□□□□ 0.76
SCN11AQ9UI33 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN11AQ9UI33 NDUFV2P1-201ENST00000596415 907 ntBASIC19.78■□□□□ 0.76
SCN11AQ9UI33 AC097724.1-201ENST00000609581 426 ntBASIC19.78■□□□□ 0.76
SCN11AQ9UI33 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 AL157414.3-201ENST00000624276 1954 ntBASIC19.77■□□□□ 0.76
SCN11AQ9UI33 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 AP001258.2-201ENST00000529891 490 ntBASIC19.77■□□□□ 0.76
SCN11AQ9UI33 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 AC020914.3-201ENST00000594712 304 ntBASIC19.77■□□□□ 0.76
SCN11AQ9UI33 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SCN11AQ9UI33 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
SCN11AQ9UI33 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms