Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AC106881.1-201ENST00000605849 3329 ntBASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AC138035.3-201ENST00000622706 2791 ntBASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AC004461.1-201ENST00000412461 403 ntBASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 CNN2P2-201ENST00000443536 909 ntBASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 CNN2P3-201ENST00000450201 906 ntBASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AL139010.1-201ENST00000454878 894 ntBASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AC069335.1-201ENST00000489972 472 ntBASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AL136317.3-201ENST00000618497 906 ntBASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 PTENP1-202ENST00000532280 3996 ntBASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 SBF1P1-201ENST00000444527 5631 ntBASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms