Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 AC108073.2-201ENST00000464002 357 ntBASIC14.46□□□□□ -0.09
CLN6Q9NWW5 RNPS1P1-201ENST00000507437 918 ntBASIC14.46□□□□□ -0.09
CLN6Q9NWW5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLN6Q9NWW5 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLN6Q9NWW5 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLN6Q9NWW5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CLN6Q9NWW5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLN6Q9NWW5 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLN6Q9NWW5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.46□□□□□ -0.1
CLN6Q9NWW5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLN6Q9NWW5 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLN6Q9NWW5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLN6Q9NWW5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.46□□□□□ -0.1
CLN6Q9NWW5 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.46□□□□□ -0.1
CLN6Q9NWW5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLN6Q9NWW5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLN6Q9NWW5 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 AC127383.1-201ENST00000444697 1800 ntBASIC14.45□□□□□ -0.1
CLN6Q9NWW5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 AC139749.1-202ENST00000617529 3139 ntBASIC14.45□□□□□ -0.1
CLN6Q9NWW5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.45□□□□□ -0.1
CLN6Q9NWW5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 CLEC4GP1-201ENST00000596555 870 ntBASIC14.45□□□□□ -0.1
CLN6Q9NWW5 AC004790.2-201ENST00000623588 572 ntBASIC14.45□□□□□ -0.1
CLN6Q9NWW5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms