Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 AL133267.1-201ENST00000398220 340 ntBASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 AC023157.3-201ENST00000619086 2088 ntBASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.46■□□□□ 0.39
BLOC1S4Q9NUP1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
BLOC1S4Q9NUP1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.46■□□□□ 0.38
BLOC1S4Q9NUP1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
BLOC1S4Q9NUP1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
BLOC1S4Q9NUP1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
BLOC1S4Q9NUP1 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 AC091951.1-201ENST00000512854 2465 ntBASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 AC138969.3-201ENST00000546612 1459 ntBASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 AC138932.2-201ENST00000548268 1459 ntBASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 AC126755.4-201ENST00000549796 1459 ntBASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
BLOC1S4Q9NUP1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 AC126365.1-201ENST00000578585 1514 ntBASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 AL512638.1-201ENST00000457493 794 ntBASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 AC104794.3-201ENST00000566840 1248 ntBASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 AL158212.4-201ENST00000624062 1286 ntBASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 MST1L-201ENST00000442552 2185 ntBASIC17.44■□□□□ 0.38
BLOC1S4Q9NUP1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms