Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.83■□□□□ 0.6
SALL1Q9NSC2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SALL1Q9NSC2 AC090340.1-201ENST00000620778 4980 ntBASIC18.83■□□□□ 0.6
SALL1Q9NSC2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.83■□□□□ 0.6
SALL1Q9NSC2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL1Q9NSC2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL1Q9NSC2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SALL1Q9NSC2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL1Q9NSC2 AL139384.1-201ENST00000612143 3047 ntBASIC18.83■□□□□ 0.6
SALL1Q9NSC2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL1Q9NSC2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.83■□□□□ 0.6
SALL1Q9NSC2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL1Q9NSC2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL1Q9NSC2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL1Q9NSC2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SALL1Q9NSC2 AC134312.5-201ENST00000568031 1313 ntBASIC18.82■□□□□ 0.6
SALL1Q9NSC2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SALL1Q9NSC2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 CTBP2P5-201ENST00000454986 1264 ntBASIC18.81■□□□□ 0.6
SALL1Q9NSC2 AC106760.1-201ENST00000508690 800 ntBASIC18.81■□□□□ 0.6
SALL1Q9NSC2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 GNRHR2-203ENST00000581100 1187 ntBASIC18.81■□□□□ 0.6
SALL1Q9NSC2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 AC093525.8-201ENST00000624099 1342 ntBASIC18.81■□□□□ 0.6
SALL1Q9NSC2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SALL1Q9NSC2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 RPL7P3-201ENST00000441388 714 ntBASIC18.8■□□□□ 0.6
SALL1Q9NSC2 KLF2P4-201ENST00000451959 1225 ntBASIC18.8■□□□□ 0.6
SALL1Q9NSC2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 AL033527.4-201ENST00000641026 673 ntBASIC18.8■□□□□ 0.6
SALL1Q9NSC2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SALL1Q9NSC2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms