Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.52□□□□□ -0.08
SDHAF3Q9NRP4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.52□□□□□ -0.08
SDHAF3Q9NRP4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.52□□□□□ -0.08
SDHAF3Q9NRP4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SDHAF3Q9NRP4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.52□□□□□ -0.09
SDHAF3Q9NRP4 PCDHA3-202ENST00000532566 4594 ntBASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 AL161772.1-201ENST00000610494 4412 ntBASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 AC010336.2-201ENST00000564226 506 ntBASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 AC022188.1-201ENST00000620960 1664 ntBASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 AL365203.3-201ENST00000609742 2057 ntBASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 AC022144.1-201ENST00000602255 1580 ntBASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 AC010491.1-201ENST00000563101 2797 ntBASIC14.51□□□□□ -0.09
SDHAF3Q9NRP4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms