Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.07■□□□□ 0
BRF2Q9HAW0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.07■□□□□ 0
BRF2Q9HAW0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
BRF2Q9HAW0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.07■□□□□ 0
BRF2Q9HAW0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 Z97205.2-201ENST00000564697 1639 ntBASIC15.07■□□□□ 0
BRF2Q9HAW0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.07■□□□□ 0
BRF2Q9HAW0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.07■□□□□ 0
BRF2Q9HAW0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
BRF2Q9HAW0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.07■□□□□ 0
BRF2Q9HAW0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
BRF2Q9HAW0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.07■□□□□ 0
BRF2Q9HAW0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.07■□□□□ 0
BRF2Q9HAW0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.07■□□□□ 0
BRF2Q9HAW0 HLA-V-204ENST00000476601 1289 ntBASIC15.07■□□□□ 0
BRF2Q9HAW0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
BRF2Q9HAW0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.07■□□□□ 0
BRF2Q9HAW0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.07■□□□□ 0
BRF2Q9HAW0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.07■□□□□ 0
BRF2Q9HAW0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.07■□□□□ 0
BRF2Q9HAW0 AC079781.4-201ENST00000641908 219 ntBASIC15.07■□□□□ 0
BRF2Q9HAW0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
BRF2Q9HAW0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
BRF2Q9HAW0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.07■□□□□ 0
BRF2Q9HAW0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.07■□□□□ 0
BRF2Q9HAW0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.06■□□□□ 0
BRF2Q9HAW0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.06■□□□□ 0
BRF2Q9HAW0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
BRF2Q9HAW0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.06■□□□□ 0
BRF2Q9HAW0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.06■□□□□ 0
BRF2Q9HAW0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.06■□□□□ 0
BRF2Q9HAW0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
BRF2Q9HAW0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.06■□□□□ 0
BRF2Q9HAW0 CNN2P2-201ENST00000443536 909 ntBASIC15.06■□□□□ 0
BRF2Q9HAW0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 DNAJB3-202ENST00000449667 1266 ntBASIC15.06■□□□□ 0
BRF2Q9HAW0 CNN2P3-201ENST00000450201 906 ntBASIC15.06■□□□□ 0
BRF2Q9HAW0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.06■□□□□ 0
BRF2Q9HAW0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.06■□□□□ 0
BRF2Q9HAW0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.06■□□□□ 0
BRF2Q9HAW0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.06■□□□□ 0
BRF2Q9HAW0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.06■□□□□ 0
BRF2Q9HAW0 AL136317.3-201ENST00000618497 906 ntBASIC15.06■□□□□ 0
BRF2Q9HAW0 AL033527.5-202ENST00000641632 1098 ntBASIC15.06■□□□□ 0
BRF2Q9HAW0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.06■□□□□ 0
BRF2Q9HAW0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
BRF2Q9HAW0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
BRF2Q9HAW0 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.06■□□□□ 0
BRF2Q9HAW0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.06■□□□□ 0
BRF2Q9HAW0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
BRF2Q9HAW0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.05■□□□□ 0
BRF2Q9HAW0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.05■□□□□ 0
BRF2Q9HAW0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.05■□□□□ 0
BRF2Q9HAW0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.05■□□□□ 0
BRF2Q9HAW0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
BRF2Q9HAW0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.05■□□□□ 0
BRF2Q9HAW0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.05■□□□□ 0
BRF2Q9HAW0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.05■□□□□ -0
BRF2Q9HAW0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms