Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
UPF2Q9HAU5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 AF186996.4-201ENST00000467186 377 ntBASIC19.42■□□□□ 0.7
UPF2Q9HAU5 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 AC012640.2-201ENST00000561606 901 ntBASIC19.42■□□□□ 0.7
UPF2Q9HAU5 TP73-AS1-207ENST00000624167 988 ntBASIC19.42■□□□□ 0.7
UPF2Q9HAU5 AC117500.6-201ENST00000624871 588 ntBASIC19.42■□□□□ 0.7
UPF2Q9HAU5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 AC232323.1-201ENST00000540724 2099 ntBASIC19.42■□□□□ 0.7
UPF2Q9HAU5 REXO1L5P-201ENST00000622260 2098 ntBASIC19.42■□□□□ 0.7
UPF2Q9HAU5 AC018892.3-201ENST00000623986 2499 ntBASIC19.42■□□□□ 0.7
UPF2Q9HAU5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UPF2Q9HAU5 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 AL645939.2-201ENST00000427340 991 ntBASIC19.41■□□□□ 0.7
UPF2Q9HAU5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.41■□□□□ 0.7
UPF2Q9HAU5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UPF2Q9HAU5 AL390755.1-201ENST00000623716 2027 ntBASIC19.41■□□□□ 0.7
UPF2Q9HAU5 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms