Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 AC018892.3-201ENST00000623986 2499 ntBASIC18.31■□□□□ 0.52
SH2D4AQ9H788 PCDHA1-201ENST00000378133 2726 ntBASIC18.31■□□□□ 0.52
SH2D4AQ9H788 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 KRT223P-202ENST00000449164 1292 ntBASIC18.31■□□□□ 0.52
SH2D4AQ9H788 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 AC104989.1-201ENST00000519711 778 ntBASIC18.31■□□□□ 0.52
SH2D4AQ9H788 AC068587.3-201ENST00000526613 355 ntBASIC18.31■□□□□ 0.52
SH2D4AQ9H788 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH2D4AQ9H788 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 AC005229.1-201ENST00000392885 409 ntBASIC18.3■□□□□ 0.52
SH2D4AQ9H788 AL355864.2-201ENST00000447420 863 ntBASIC18.3■□□□□ 0.52
SH2D4AQ9H788 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 AL513523.2-202ENST00000427283 2040 ntBASIC18.3■□□□□ 0.52
SH2D4AQ9H788 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SH2D4AQ9H788 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH2D4AQ9H788 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH2D4AQ9H788 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.29■□□□□ 0.52
SH2D4AQ9H788 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.29■□□□□ 0.52
SH2D4AQ9H788 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SH2D4AQ9H788 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.29■□□□□ 0.52
SH2D4AQ9H788 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH2D4AQ9H788 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.29■□□□□ 0.52
SH2D4AQ9H788 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH2D4AQ9H788 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SH2D4AQ9H788 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SH2D4AQ9H788 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH2D4AQ9H788 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SH2D4AQ9H788 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms