Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 AC055876.3-201ENST00000431496 288 ntBASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 AC114501.2-201ENST00000439631 535 ntBASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 AC138649.4-201ENST00000612222 287 ntBASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
CCSER1Q9C0I3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCSER1Q9C0I3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
CCSER1Q9C0I3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCSER1Q9C0I3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCSER1Q9C0I3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCSER1Q9C0I3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CCSER1Q9C0I3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCSER1Q9C0I3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCSER1Q9C0I3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCSER1Q9C0I3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.58■□□□□ 0.41
CCSER1Q9C0I3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 AC009407.1-201ENST00000568958 598 ntBASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCSER1Q9C0I3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 AC004890.2-204ENST00000481968 304 ntBASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 AC092337.1-201ENST00000568699 1129 ntBASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 AC106028.4-201ENST00000614509 607 ntBASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms