Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 AC024909.3-201ENST00000611513 2257 ntBASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 AC009093.2-202ENST00000620513 2079 ntBASIC19.87■□□□□ 0.77
SHANK3Q9BYB0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 AC010141.1-201ENST00000411585 623 ntBASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 AC069218.1-201ENST00000435269 762 ntBASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 AC234782.1-201ENST00000451950 919 ntBASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 AC127383.1-201ENST00000444697 1800 ntBASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SHANK3Q9BYB0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 MST1L-201ENST00000442552 2185 ntBASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 AC125604.1-201ENST00000496255 707 ntBASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 CU633904.3-201ENST00000624042 1029 ntBASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 AC090164.2-201ENST00000611487 516 ntBASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 AL023803.2-201ENST00000620080 638 ntBASIC19.85■□□□□ 0.77
SHANK3Q9BYB0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.84■□□□□ 0.77
SHANK3Q9BYB0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
SHANK3Q9BYB0 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHANK3Q9BYB0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHANK3Q9BYB0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SHANK3Q9BYB0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms