Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 AL391001.1-201ENST00000602747 715 ntBASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 AC004706.3-202ENST00000621574 984 ntBASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 AC008267.7-201ENST00000624570 1194 ntBASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 PI4KAP1-204ENST00000612579 1703 ntBASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP4Q9BWG4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 ARMC10P1-201ENST00000313754 855 ntBASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 PTCHD3P3-201ENST00000403073 906 ntBASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 RBM17P3-201ENST00000417687 1192 ntBASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 AC107918.2-201ENST00000530817 355 ntBASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 RN7SL850P-201ENST00000579959 291 ntBASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 AC099336.1-202ENST00000602961 463 ntBASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 U82695.1-201ENST00000635752 1889 ntBASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SSBP4Q9BWG4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SSBP4Q9BWG4 AC005252.3-201ENST00000623855 2258 ntBASIC12□□□□□ -0.49
SSBP4Q9BWG4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SSBP4Q9BWG4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SSBP4Q9BWG4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12□□□□□ -0.49
SSBP4Q9BWG4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SSBP4Q9BWG4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12□□□□□ -0.49
SSBP4Q9BWG4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SSBP4Q9BWG4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms