Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 ADH5P3-201ENST00000433842 1137 ntBASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 RN7SL589P-201ENST00000481268 310 ntBASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 CICP11-201ENST00000434745 2827 ntBASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.41■□□□□ 0.38
BPIFA3Q9BQP9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 AC007967.2-201ENST00000432613 625 ntBASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 AC243562.1-201ENST00000560672 389 ntBASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BPIFA3Q9BQP9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BPIFA3Q9BQP9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BPIFA3Q9BQP9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BPIFA3Q9BQP9 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BPIFA3Q9BQP9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
BPIFA3Q9BQP9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
BPIFA3Q9BQP9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 AC084121.4-201ENST00000641598 221 ntBASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 AC092865.6-201ENST00000642101 219 ntBASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 AF228730.8-201ENST00000642140 221 ntBASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BPIFA3Q9BQP9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BPIFA3Q9BQP9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.38■□□□□ 0.37
BPIFA3Q9BQP9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
BPIFA3Q9BQP9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BPIFA3Q9BQP9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms