Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.77■□□□□ 0.43
PTPN18Q99952 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTPN18Q99952 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
PTPN18Q99952 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN18Q99952 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PTPN18Q99952 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPN18Q99952 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN18Q99952 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PTPN18Q99952 AC090340.1-201ENST00000620778 4980 ntBASIC17.76■□□□□ 0.43
PTPN18Q99952 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN18Q99952 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPN18Q99952 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPN18Q99952 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN18Q99952 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN18Q99952 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN18Q99952 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN18Q99952 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN18Q99952 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN18Q99952 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.76■□□□□ 0.43
PTPN18Q99952 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.76■□□□□ 0.43
PTPN18Q99952 AL161670.2-201ENST00000557650 1227 ntBASIC17.76■□□□□ 0.43
PTPN18Q99952 MIR4750-201ENST00000584564 56 ntBASIC17.76■□□□□ 0.43
PTPN18Q99952 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.76■□□□□ 0.43
PTPN18Q99952 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN18Q99952 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PTPN18Q99952 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN18Q99952 AC022188.1-201ENST00000620960 1664 ntBASIC17.76■□□□□ 0.43
PTPN18Q99952 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PTPN18Q99952 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN18Q99952 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PTPN18Q99952 KRT8P29-201ENST00000420409 1371 ntBASIC17.76■□□□□ 0.43
PTPN18Q99952 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN18Q99952 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTPN18Q99952 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PTPN18Q99952 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN18Q99952 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PTPN18Q99952 AC007787.1-201ENST00000588095 1583 ntBASIC17.75■□□□□ 0.43
PTPN18Q99952 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN18Q99952 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN18Q99952 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
PTPN18Q99952 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN18Q99952 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.75■□□□□ 0.43
PTPN18Q99952 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN18Q99952 AL355334.1-201ENST00000417713 215 ntBASIC17.75■□□□□ 0.43
PTPN18Q99952 AC104073.2-201ENST00000453737 312 ntBASIC17.75■□□□□ 0.43
PTPN18Q99952 RNMTL1P1-201ENST00000454103 560 ntBASIC17.75■□□□□ 0.43
PTPN18Q99952 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
PTPN18Q99952 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PTPN18Q99952 BNIP3P13-201ENST00000599968 566 ntBASIC17.75■□□□□ 0.43
PTPN18Q99952 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN18Q99952 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.75■□□□□ 0.43
PTPN18Q99952 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.75■□□□□ 0.43
PTPN18Q99952 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTPN18Q99952 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PTPN18Q99952 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PTPN18Q99952 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 KRT8P14-201ENST00000414254 1442 ntBASIC17.74■□□□□ 0.43
PTPN18Q99952 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.74■□□□□ 0.43
PTPN18Q99952 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PTPN18Q99952 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PTPN18Q99952 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 AL158070.2-201ENST00000623713 1621 ntBASIC17.74■□□□□ 0.43
PTPN18Q99952 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPN18Q99952 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTPN18Q99952 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPN18Q99952 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPN18Q99952 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPN18Q99952 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.74■□□□□ 0.43
PTPN18Q99952 AC011742.3-201ENST00000439053 820 ntBASIC17.74■□□□□ 0.43
PTPN18Q99952 AC234782.1-201ENST00000451950 919 ntBASIC17.74■□□□□ 0.43
PTPN18Q99952 AC021723.1-201ENST00000486306 515 ntBASIC17.74■□□□□ 0.43
PTPN18Q99952 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.74■□□□□ 0.43
PTPN18Q99952 AC106820.3-201ENST00000561653 397 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms