Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
NDNQ99608 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NDNQ99608 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.88■□□□□ 0.13
NDNQ99608 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.88■□□□□ 0.13
NDNQ99608 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.88■□□□□ 0.13
NDNQ99608 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.88■□□□□ 0.13
NDNQ99608 AC005829.1-201ENST00000570002 483 ntBASIC15.88■□□□□ 0.13
NDNQ99608 MIR4469-201ENST00000583919 79 ntBASIC15.88■□□□□ 0.13
NDNQ99608 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 AC105339.1-204ENST00000636249 355 ntBASIC15.88■□□□□ 0.13
NDNQ99608 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.88■□□□□ 0.13
NDNQ99608 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.88■□□□□ 0.13
NDNQ99608 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.88■□□□□ 0.13
NDNQ99608 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.88■□□□□ 0.13
NDNQ99608 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NDNQ99608 GRK6P1-201ENST00000400595 1711 ntBASIC15.88■□□□□ 0.13
NDNQ99608 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.88■□□□□ 0.13
NDNQ99608 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.88■□□□□ 0.13
NDNQ99608 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NDNQ99608 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NDNQ99608 CYP4F24P-201ENST00000586049 1580 ntBASIC15.87■□□□□ 0.13
NDNQ99608 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.87■□□□□ 0.13
NDNQ99608 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.87■□□□□ 0.13
NDNQ99608 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NDNQ99608 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.87■□□□□ 0.13
NDNQ99608 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
NDNQ99608 AC004987.2-201ENST00000395959 1148 ntBASIC15.87■□□□□ 0.13
NDNQ99608 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.87■□□□□ 0.13
NDNQ99608 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.87■□□□□ 0.13
NDNQ99608 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.87■□□□□ 0.13
NDNQ99608 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.87■□□□□ 0.13
NDNQ99608 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NDNQ99608 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.87■□□□□ 0.13
NDNQ99608 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.87■□□□□ 0.13
NDNQ99608 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.87■□□□□ 0.13
NDNQ99608 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
NDNQ99608 AC010327.4-202ENST00000591484 748 ntBASIC15.87■□□□□ 0.13
NDNQ99608 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.87■□□□□ 0.13
NDNQ99608 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.87■□□□□ 0.13
NDNQ99608 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.87■□□□□ 0.13
NDNQ99608 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.87■□□□□ 0.13
NDNQ99608 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
NDNQ99608 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.87■□□□□ 0.13
NDNQ99608 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.87■□□□□ 0.13
NDNQ99608 AC068587.6-202ENST00000641839 5619 ntBASIC15.87■□□□□ 0.13
NDNQ99608 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NDNQ99608 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NDNQ99608 AC105250.1-201ENST00000509378 2057 ntBASIC15.87■□□□□ 0.13
NDNQ99608 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NDNQ99608 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.86■□□□□ 0.13
NDNQ99608 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.86■□□□□ 0.13
NDNQ99608 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.86■□□□□ 0.13
NDNQ99608 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.86■□□□□ 0.13
NDNQ99608 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NDNQ99608 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NDNQ99608 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NDNQ99608 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms