Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
GAFA1Q96PS6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
GAFA1Q96PS6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.08□□□□□ -0.31
GAFA1Q96PS6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
GAFA1Q96PS6 AC087481.3-201ENST00000602886 1894 ntBASIC13.08□□□□□ -0.32
GAFA1Q96PS6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 CICP6-201ENST00000457191 2729 ntBASIC13.08□□□□□ -0.32
GAFA1Q96PS6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
GAFA1Q96PS6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 HMGN1P19-201ENST00000436976 333 ntBASIC13.07□□□□□ -0.32
GAFA1Q96PS6 TSPY16P-201ENST00000449843 468 ntBASIC13.07□□□□□ -0.32
GAFA1Q96PS6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 MEIS3P1-201ENST00000495167 958 ntBASIC13.07□□□□□ -0.32
GAFA1Q96PS6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 SERBP1P5-201ENST00000510079 1181 ntBASIC13.07□□□□□ -0.32
GAFA1Q96PS6 DOC2GP-202ENST00000514950 1163 ntBASIC13.07□□□□□ -0.32
GAFA1Q96PS6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 AC015910.1-201ENST00000579400 975 ntBASIC13.07□□□□□ -0.32
GAFA1Q96PS6 AC009118.2-201ENST00000613275 655 ntBASIC13.07□□□□□ -0.32
GAFA1Q96PS6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 AC136621.1-201ENST00000624017 2304 ntBASIC13.07□□□□□ -0.32
GAFA1Q96PS6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.07□□□□□ -0.32
GAFA1Q96PS6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 SSR4P1-203ENST00000599569 2260 ntBASIC13.06□□□□□ -0.32
GAFA1Q96PS6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
GAFA1Q96PS6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms