Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.58□□□□□ -0.08
HPS1Q92902 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.58□□□□□ -0.08
HPS1Q92902 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.58□□□□□ -0.08
HPS1Q92902 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.58□□□□□ -0.08
HPS1Q92902 AL139424.1-201ENST00000607572 797 ntBASIC14.58□□□□□ -0.08
HPS1Q92902 AC004706.3-202ENST00000621574 984 ntBASIC14.58□□□□□ -0.08
HPS1Q92902 AL034417.3-201ENST00000641100 1043 ntBASIC14.58□□□□□ -0.08
HPS1Q92902 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HPS1Q92902 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HPS1Q92902 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HPS1Q92902 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.58□□□□□ -0.08
HPS1Q92902 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.58□□□□□ -0.08
HPS1Q92902 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
HPS1Q92902 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.58□□□□□ -0.08
HPS1Q92902 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HPS1Q92902 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HPS1Q92902 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
HPS1Q92902 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
HPS1Q92902 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.58□□□□□ -0.08
HPS1Q92902 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.58□□□□□ -0.08
HPS1Q92902 REXO1L2P-201ENST00000425429 2069 ntBASIC14.57□□□□□ -0.08
HPS1Q92902 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
HPS1Q92902 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.57□□□□□ -0.08
HPS1Q92902 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.57□□□□□ -0.08
HPS1Q92902 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
HPS1Q92902 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.57□□□□□ -0.08
HPS1Q92902 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HPS1Q92902 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.57□□□□□ -0.08
HPS1Q92902 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HPS1Q92902 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HPS1Q92902 HMGB3P14-201ENST00000494195 599 ntBASIC14.57□□□□□ -0.08
HPS1Q92902 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.57□□□□□ -0.08
HPS1Q92902 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.57□□□□□ -0.08
HPS1Q92902 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 AC010327.4-202ENST00000591484 748 ntBASIC14.57□□□□□ -0.08
HPS1Q92902 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
HPS1Q92902 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HPS1Q92902 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
HPS1Q92902 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.57□□□□□ -0.08
HPS1Q92902 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
HPS1Q92902 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
HPS1Q92902 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.57□□□□□ -0.08
HPS1Q92902 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HPS1Q92902 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.57□□□□□ -0.08
HPS1Q92902 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
HPS1Q92902 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HPS1Q92902 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
HPS1Q92902 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.56□□□□□ -0.08
HPS1Q92902 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HPS1Q92902 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.56□□□□□ -0.08
HPS1Q92902 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HPS1Q92902 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HPS1Q92902 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
HPS1Q92902 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HPS1Q92902 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HPS1Q92902 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.56□□□□□ -0.08
HPS1Q92902 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HPS1Q92902 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HPS1Q92902 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HPS1Q92902 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
HPS1Q92902 AC007967.2-201ENST00000432613 625 ntBASIC14.56□□□□□ -0.08
HPS1Q92902 COA4-204ENST00000541455 1038 ntTSL 5 BASIC14.56□□□□□ -0.08
HPS1Q92902 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.56□□□□□ -0.08
HPS1Q92902 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.56□□□□□ -0.08
HPS1Q92902 AC064836.3-201ENST00000607928 673 ntBASIC14.56□□□□□ -0.08
HPS1Q92902 AC108359.1-201ENST00000616451 1211 ntBASIC14.56□□□□□ -0.08
HPS1Q92902 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HPS1Q92902 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.56□□□□□ -0.08
HPS1Q92902 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.56□□□□□ -0.08
HPS1Q92902 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HPS1Q92902 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
HPS1Q92902 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms