Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 PRYP6-201ENST00000514804 343 ntBASIC16.25■□□□□ 0.19
SCG3Q8WXD2 AC069120.2-201ENST00000524091 540 ntBASIC16.25■□□□□ 0.19
SCG3Q8WXD2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 MIR4745-201ENST00000577608 62 ntBASIC16.25■□□□□ 0.19
SCG3Q8WXD2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
SCG3Q8WXD2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 AL589702.1-201ENST00000641229 1509 ntBASIC16.24■□□□□ 0.19
SCG3Q8WXD2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 MIR4321-201ENST00000592276 80 ntBASIC16.24■□□□□ 0.19
SCG3Q8WXD2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SCG3Q8WXD2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 HAUS4P1-201ENST00000406739 1145 ntBASIC16.23■□□□□ 0.19
SCG3Q8WXD2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 AL589935.2-201ENST00000616471 1231 ntBASIC16.23■□□□□ 0.19
SCG3Q8WXD2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.23■□□□□ 0.19
SCG3Q8WXD2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SCG3Q8WXD2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms