Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APH1BQ8WW43 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APH1BQ8WW43 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 TSPY19P-201ENST00000418461 509 ntBASIC14.28□□□□□ -0.12
APH1BQ8WW43 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 TSPY18P-201ENST00000441642 509 ntBASIC14.28□□□□□ -0.12
APH1BQ8WW43 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APH1BQ8WW43 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APH1BQ8WW43 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 WASH3P-207ENST00000560956 1394 ntBASIC14.28□□□□□ -0.12
APH1BQ8WW43 AC012640.2-201ENST00000561606 901 ntBASIC14.28□□□□□ -0.12
APH1BQ8WW43 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 AC061975.2-201ENST00000581722 295 ntBASIC14.28□□□□□ -0.12
APH1BQ8WW43 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 AL121772.3-201ENST00000610840 674 ntBASIC14.28□□□□□ -0.12
APH1BQ8WW43 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.28□□□□□ -0.12
APH1BQ8WW43 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APH1BQ8WW43 FO538757.1-201ENST00000623083 1397 ntBASIC14.28□□□□□ -0.12
APH1BQ8WW43 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 MTHFR-210ENST00000641407 2387 ntBASIC14.28□□□□□ -0.12
APH1BQ8WW43 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APH1BQ8WW43 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
APH1BQ8WW43 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APH1BQ8WW43 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APH1BQ8WW43 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APH1BQ8WW43 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
APH1BQ8WW43 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
APH1BQ8WW43 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APH1BQ8WW43 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APH1BQ8WW43 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.27□□□□□ -0.12
APH1BQ8WW43 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.27□□□□□ -0.12
APH1BQ8WW43 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APH1BQ8WW43 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
APH1BQ8WW43 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.27□□□□□ -0.12
APH1BQ8WW43 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
APH1BQ8WW43 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.27□□□□□ -0.12
APH1BQ8WW43 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APH1BQ8WW43 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
APH1BQ8WW43 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APH1BQ8WW43 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APH1BQ8WW43 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.27□□□□□ -0.12
APH1BQ8WW43 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.27□□□□□ -0.12
APH1BQ8WW43 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APH1BQ8WW43 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APH1BQ8WW43 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APH1BQ8WW43 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APH1BQ8WW43 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 SAPCD2P3-201ENST00000455031 850 ntBASIC14.27□□□□□ -0.13
APH1BQ8WW43 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 AC105339.3-201ENST00000560043 636 ntBASIC14.27□□□□□ -0.13
APH1BQ8WW43 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 AC005593.1-201ENST00000624894 515 ntBASIC14.27□□□□□ -0.13
APH1BQ8WW43 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APH1BQ8WW43 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APH1BQ8WW43 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APH1BQ8WW43 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APH1BQ8WW43 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APH1BQ8WW43 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APH1BQ8WW43 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APH1BQ8WW43 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
APH1BQ8WW43 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APH1BQ8WW43 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APH1BQ8WW43 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.26□□□□□ -0.13
APH1BQ8WW43 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
APH1BQ8WW43 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.26□□□□□ -0.13
APH1BQ8WW43 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APH1BQ8WW43 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APH1BQ8WW43 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.26□□□□□ -0.13
APH1BQ8WW43 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APH1BQ8WW43 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APH1BQ8WW43 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APH1BQ8WW43 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
APH1BQ8WW43 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APH1BQ8WW43 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APH1BQ8WW43 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms