Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.77■□□□□ 0.11
HMGB4Q8WW32 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 AC020907.1-201ENST00000616460 1350 ntBASIC15.76■□□□□ 0.11
HMGB4Q8WW32 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 BCYRN1-201ENST00000418539 200 ntBASIC15.76■□□□□ 0.11
HMGB4Q8WW32 AC026954.1-201ENST00000429771 1293 ntBASIC15.76■□□□□ 0.11
HMGB4Q8WW32 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 PFN1P12-201ENST00000455938 534 ntBASIC15.76■□□□□ 0.11
HMGB4Q8WW32 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 AP001582.1-201ENST00000525856 295 ntBASIC15.76■□□□□ 0.11
HMGB4Q8WW32 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 KRT90P-201ENST00000549264 1064 ntBASIC15.76■□□□□ 0.11
HMGB4Q8WW32 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.76■□□□□ 0.11
HMGB4Q8WW32 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGB4Q8WW32 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 AC006449.6-201ENST00000612330 2296 ntBASIC15.75■□□□□ 0.11
HMGB4Q8WW32 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
HMGB4Q8WW32 AC244093.1-201ENST00000610837 814 ntBASIC15.75■□□□□ 0.11
HMGB4Q8WW32 RHOXF1P1-202ENST00000635473 501 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms