Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LMO3Q8TAP4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 AC138969.3-201ENST00000546612 1459 ntBASIC16.81■□□□□ 0.28
LMO3Q8TAP4 AC138932.2-201ENST00000548268 1459 ntBASIC16.81■□□□□ 0.28
LMO3Q8TAP4 AC126755.4-201ENST00000549796 1459 ntBASIC16.81■□□□□ 0.28
LMO3Q8TAP4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 PMS2P2-201ENST00000425039 1128 ntBASIC16.81■□□□□ 0.28
LMO3Q8TAP4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 IGHV3-42-201ENST00000520410 361 ntBASIC16.81■□□□□ 0.28
LMO3Q8TAP4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMO3Q8TAP4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.8■□□□□ 0.28
LMO3Q8TAP4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 AC000095.1-201ENST00000603208 874 ntBASIC16.8■□□□□ 0.28
LMO3Q8TAP4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 AGAP7P-201ENST00000582299 2062 ntBASIC16.8■□□□□ 0.28
LMO3Q8TAP4 AGAP14-201ENST00000624701 2060 ntBASIC16.8■□□□□ 0.28
LMO3Q8TAP4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 MROH4P-201ENST00000431302 1578 ntBASIC16.8■□□□□ 0.28
LMO3Q8TAP4 AC022144.1-201ENST00000602255 1580 ntBASIC16.8■□□□□ 0.28
LMO3Q8TAP4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LMO3Q8TAP4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LMO3Q8TAP4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms