Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 AC244107.1-201ENST00000442033 332 ntBASIC16.9■□□□□ 0.3
BEST2Q8NFU1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 AC011495.1-201ENST00000498085 584 ntBASIC16.9■□□□□ 0.3
BEST2Q8NFU1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 AC000095.1-201ENST00000603208 874 ntBASIC16.9■□□□□ 0.3
BEST2Q8NFU1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
BEST2Q8NFU1 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.89■□□□□ 0.3
BEST2Q8NFU1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.89■□□□□ 0.3
BEST2Q8NFU1 AL139384.1-201ENST00000612143 3047 ntBASIC16.89■□□□□ 0.29
BEST2Q8NFU1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 RPL13AP25-201ENST00000484130 612 ntBASIC16.89■□□□□ 0.29
BEST2Q8NFU1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 AC015910.1-201ENST00000579400 975 ntBASIC16.89■□□□□ 0.29
BEST2Q8NFU1 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
BEST2Q8NFU1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 AL442647.2-201ENST00000429864 857 ntBASIC16.88■□□□□ 0.29
BEST2Q8NFU1 U91328.1-201ENST00000437528 223 ntBASIC16.88■□□□□ 0.29
BEST2Q8NFU1 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 KRT17P7-201ENST00000451704 1104 ntBASIC16.88■□□□□ 0.29
BEST2Q8NFU1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
BEST2Q8NFU1 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms