Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 POM121L8P-201ENST00000417732 1281 ntBASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 POM121L9P-203ENST00000441984 1285 ntBASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 RN7SL713P-201ENST00000582127 302 ntBASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 PPY2P-201ENST00000582808 702 ntBASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 AC018695.7-201ENST00000624587 2492 ntBASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 AC022188.1-201ENST00000620960 1664 ntBASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHDC9Q8NEP7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 EIF3FP3-201ENST00000434851 1086 ntBASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 IMP3P2-201ENST00000489760 475 ntBASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 AP003171.2-201ENST00000528208 925 ntBASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 AC073413.1-201ENST00000603927 732 ntBASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 AC138649.2-201ENST00000615886 705 ntBASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 LTB4R2-202ENST00000528054 3092 ntBASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHDC9Q8NEP7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.11■□□□□ 0.33
KLHDC9Q8NEP7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHDC9Q8NEP7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
KLHDC9Q8NEP7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHDC9Q8NEP7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHDC9Q8NEP7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.11■□□□□ 0.33
KLHDC9Q8NEP7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.11■□□□□ 0.33
KLHDC9Q8NEP7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KLHDC9Q8NEP7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KLHDC9Q8NEP7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.11■□□□□ 0.33
KLHDC9Q8NEP7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms