Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SETD9Q8NE22 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SETD9Q8NE22 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SETD9Q8NE22 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.54□□□□□ -0.08
SETD9Q8NE22 AC041040.2-201ENST00000622926 2899 ntBASIC14.54□□□□□ -0.08
SETD9Q8NE22 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SETD9Q8NE22 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SETD9Q8NE22 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SETD9Q8NE22 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 AC005840.4-201ENST00000541242 2494 ntBASIC14.53□□□□□ -0.08
SETD9Q8NE22 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 BEND3P1-201ENST00000421591 1944 ntBASIC14.53□□□□□ -0.08
SETD9Q8NE22 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.53□□□□□ -0.08
SETD9Q8NE22 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SETD9Q8NE22 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.53□□□□□ -0.08
SETD9Q8NE22 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SETD9Q8NE22 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SETD9Q8NE22 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SETD9Q8NE22 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SETD9Q8NE22 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SETD9Q8NE22 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.52□□□□□ -0.08
SETD9Q8NE22 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SETD9Q8NE22 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SETD9Q8NE22 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SETD9Q8NE22 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SETD9Q8NE22 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SETD9Q8NE22 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.52□□□□□ -0.08
SETD9Q8NE22 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SETD9Q8NE22 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.52□□□□□ -0.08
SETD9Q8NE22 WASH3P-207ENST00000560956 1394 ntBASIC14.52□□□□□ -0.08
SETD9Q8NE22 FO538757.1-201ENST00000623083 1397 ntBASIC14.52□□□□□ -0.08
SETD9Q8NE22 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.52□□□□□ -0.08
SETD9Q8NE22 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SETD9Q8NE22 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.52□□□□□ -0.09
SETD9Q8NE22 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.52□□□□□ -0.09
SETD9Q8NE22 KRT18P34-201ENST00000488218 1270 ntBASIC14.52□□□□□ -0.09
SETD9Q8NE22 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SETD9Q8NE22 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SETD9Q8NE22 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.52□□□□□ -0.09
SETD9Q8NE22 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SETD9Q8NE22 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.52□□□□□ -0.09
SETD9Q8NE22 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SETD9Q8NE22 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SETD9Q8NE22 CICP14-201ENST00000629111 2732 ntBASIC14.52□□□□□ -0.09
SETD9Q8NE22 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.52□□□□□ -0.09
SETD9Q8NE22 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SETD9Q8NE22 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
SETD9Q8NE22 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SETD9Q8NE22 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SETD9Q8NE22 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SETD9Q8NE22 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
SETD9Q8NE22 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SETD9Q8NE22 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SETD9Q8NE22 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SETD9Q8NE22 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SETD9Q8NE22 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms