Protein–RNA interactions for Protein: Q8N1F7

NUP93, Nuclear pore complex protein Nup93, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93Q8N1F7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 DGCR5-201ENST00000399539 862 ntBASIC16.61■□□□□ 0.25
NUP93Q8N1F7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 AC005034.1-201ENST00000426657 489 ntBASIC16.61■□□□□ 0.25
NUP93Q8N1F7 KRT18P64-201ENST00000434946 1219 ntBASIC16.61■□□□□ 0.25
NUP93Q8N1F7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 MYCLP2-201ENST00000449268 967 ntBASIC16.61■□□□□ 0.25
NUP93Q8N1F7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUP93Q8N1F7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 HYMAI-201ENST00000635591 3347 ntBASIC16.6■□□□□ 0.25
NUP93Q8N1F7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 AC098614.1-201ENST00000368528 745 ntBASIC16.6■□□□□ 0.25
NUP93Q8N1F7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 NME2P1-201ENST00000426182 414 ntBASIC16.6■□□□□ 0.25
NUP93Q8N1F7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 AL391069.4-201ENST00000609583 481 ntBASIC16.6■□□□□ 0.25
NUP93Q8N1F7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 AL158212.4-201ENST00000624062 1286 ntBASIC16.6■□□□□ 0.25
NUP93Q8N1F7 AL035252.4-201ENST00000624174 288 ntBASIC16.6■□□□□ 0.25
NUP93Q8N1F7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 AC112504.1-201ENST00000623415 1841 ntBASIC16.6■□□□□ 0.25
NUP93Q8N1F7 AC063926.2-201ENST00000623766 1308 ntBASIC16.6■□□□□ 0.25
NUP93Q8N1F7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 AL603832.2-201ENST00000566195 2125 ntBASIC16.6■□□□□ 0.25
NUP93Q8N1F7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.6■□□□□ 0.25
NUP93Q8N1F7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
NUP93Q8N1F7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
NUP93Q8N1F7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.59■□□□□ 0.25
NUP93Q8N1F7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUP93Q8N1F7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUP93Q8N1F7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms