Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL3Q8IVW4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDKL3Q8IVW4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.23■□□□□ 0.19
CDKL3Q8IVW4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.23■□□□□ 0.19
CDKL3Q8IVW4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKL3Q8IVW4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKL3Q8IVW4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CDKL3Q8IVW4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 SPDYE7P-202ENST00000420373 878 ntBASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 AL133215.2-201ENST00000609242 977 ntBASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL3Q8IVW4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 HIST3H2BA-201ENST00000436555 524 ntBASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 AC092865.5-201ENST00000545435 363 ntBASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 AP001059.3-201ENST00000619053 235 ntBASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 KRT8P44-201ENST00000441609 1350 ntBASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL3Q8IVW4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.21■□□□□ 0.18
CDKL3Q8IVW4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CDKL3Q8IVW4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CDKL3Q8IVW4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDKL3Q8IVW4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL3Q8IVW4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms